RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 CTNNA2P26232 953 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 CTNNA1P35221 906 aaKnown RBP22.96■■□□□ 1.27
CNTFR-202ENST00000378980 COPB2P35606 906 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 BPIFB4P59827 614 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 KCNV1Q6PIU1 500 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 ZPBP2Q6X784 338 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 BBXQ8WY36 941 aaPredicted RBP22.96■■□□□ 1.27
CNTFR-202ENST00000378980 ARL8AQ96BM9 186 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 GPR20Q99678 358 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 FAM114A2Q9NRY5 505 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 RBPJLQ9UBG7 517 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 SPOPO43791 374 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 LGR5O75473 907 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 ACO1P21399 889 aaKnown RBP22.96■■□□□ 1.27
CNTFR-202ENST00000378980 NF2P35240 595 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 MOGSQ13724 837 aa22.96■■□□□ 1.27
CNTFR-202ENST00000378980 APOBEC3GQ9HC16 384 aaKnown RBP22.96■■□□□ 1.27
CNTFR-202ENST00000378980 DNAJC25-GNG10A0A024R161 153 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 KRT14P02533 472 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 EFNA5P52803 228 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 DR1Q01658 176 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 CUL2Q13617 745 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 CELF3Q5SZQ8 465 aaKnown RBP22.95■■□□□ 1.26
CNTFR-202ENST00000378980 SEL1L2Q5TEA6 688 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 IER5Q5VY09 327 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 CPNE8Q86YQ8 564 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 TRIM51Q9BSJ1 452 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 CCDC113Q9H0I3 377 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 RAB17Q9H0T7 212 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.95■■□□□ 1.26
CNTFR-202ENST00000378980 PCDHA3Q9Y5H8 950 aa22.95■■□□□ 1.26
CNTFR-202ENST00000378980 MARK3P27448 753 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 DHX34Q14147 1143 aaKnown RBP22.94■■□□□ 1.26
CNTFR-202ENST00000378980 ZSCAN26Q16670 478 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 Q3C1V9 767 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 HSDL1Q3SXM5 330 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 CDCA2Q69YH5 1023 aaPredicted RBP22.94■■□□□ 1.26
CNTFR-202ENST00000378980 LEKR1Q6ZMV7 388 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 MCOLN2Q8IZK6 566 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 GLG1Q92896 1179 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 LRRC45Q96CN5 670 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 FHDC1Q9C0D6 1143 aaPredicted RBP22.94■■□□□ 1.26
CNTFR-202ENST00000378980 AVENQ9NQS1 362 aaPredicted RBP22.94■■□□□ 1.26
CNTFR-202ENST00000378980 FAM187AA6NFU0 413 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 TTLL13PA6NNM8 815 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 GAS2O43903 313 aaKnown RBP22.94■■□□□ 1.26
CNTFR-202ENST00000378980 MSCO60682 206 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 PHF2O75151 1096 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 RPS6KA5O75582 802 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 TTLL12Q14166 644 aaPredicted RBP22.94■■□□□ 1.26
CNTFR-202ENST00000378980 TRIM50Q86XT4 487 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 BRSK2Q8IWQ3 736 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 OR5B17Q8NGF7 314 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 MMP19Q99542 508 aa22.94■■□□□ 1.26
CNTFR-202ENST00000378980 ZBTB42B2RXF5 422 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 NOP56O00567 594 aaKnown RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 CLDN3O15551 220 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 FAM189A1O60320 539 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 CLTAP09496 248 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 PYGMP11217 842 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 HARSP12081 509 aaKnown RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 HSD17B3P37058 310 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 HNRNPH2P55795 449 aaKnown RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 MKRN4PQ13434 485 aaPredicted RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 KCTD19Q17RG1 926 aaPredicted RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 SEZ6Q53EL9 994 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 ATP8B4Q8TF62 1192 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 TCP11Q8WWU5 503 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 TRIM11Q96F44 468 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 MRPL4Q9BYD3 311 aaKnown RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 DPH5Q9H2P9 285 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 CYP1A1P04798 512 aaPredicted RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 MYBL1P10243 752 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 TBXAS1P24557 533 aaPredicted RBP22.93■■□□□ 1.26
CNTFR-202ENST00000378980 CENPCQ03188 943 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 LAMTOR4Q0VGL1 99 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 KCTD2Q14681 263 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 PLPPR4Q7Z2D5 763 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 PRELID2Q8N945 189 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 PLAAQ9Y263 795 aa22.93■■□□□ 1.26
CNTFR-202ENST00000378980 IGKV6-21A0A0C4DH24 114 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 SHOX2O60902 331 aaPredicted RBP22.92■■□□□ 1.26
CNTFR-202ENST00000378980 TOM1L1O75674 476 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 OSBPP22059 807 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 CHRNA3P32297 505 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 NOP14P78316 857 aaKnown RBP22.92■■□□□ 1.26
CNTFR-202ENST00000378980 MXD4Q14582 209 aaPredicted RBP22.92■■□□□ 1.26
CNTFR-202ENST00000378980 UAP1Q16222 522 aaPredicted RBP22.92■■□□□ 1.26
CNTFR-202ENST00000378980 DUPD1Q68J44 220 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 ZDHHC14Q8IZN3 488 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 CPA5Q8WXQ8 436 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 OPTNQ96CV9 577 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 ERP44Q9BS26 406 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 SPON1Q9HCB6 807 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 CALCOCO1Q9P1Z2 691 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 ANAPC7Q9UJX3 599 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 CNTN6Q9UQ52 1028 aa22.92■■□□□ 1.26
CNTFR-202ENST00000378980 FLT3P36888 993 aa22.91■■□□□ 1.26
CNTFR-202ENST00000378980 NCOA4Q13772 614 aa22.91■■□□□ 1.26
CNTFR-202ENST00000378980 LRIG3Q6UXM1 1119 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms