RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 IRF5Q13568 498 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 MPP2Q14168 576 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 MESDQ14696 234 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 EPC2Q52LR7 807 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 THEMIS2Q5TEJ8 643 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 PHLDB3Q6NSJ2 640 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 GJB7Q6PEY0 223 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 POTEGQ6S5H5 508 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 ADAT2Q7Z6V5 191 aaKnown RBP8.73□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC125Q86Z20 511 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 MAPKAPK5Q8IW41 473 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 FAM71AQ8IYT1 594 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 ZDHHC14Q8IZN3 488 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SLC44A5Q8NCS7 719 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 GDAP1Q8TB36 358 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 PIP4K2CQ8TBX8 421 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC17Q96LX7 622 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 FGD4Q96M96 766 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 OLFM3Q96PB7 478 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 DDX23Q9BUQ8 820 aaKnown RBP8.73□□□□□ -1.01
PTPRR-203ENST00000378778 KIAA1683Q9H0B3 1180 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 TMEM206Q9H813 350 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 MTO1Q9Y2Z2 717 aaKnown RBP8.73□□□□□ -1.01
PTPRR-203ENST00000378778 NEU2Q9Y3R4 380 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 QSER1Q2KHR3 1735 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 FOXN3O00409 490 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 TM9SF1O15321 606 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 PSTPIP1O43586 416 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 T-ENOLP0DO92 83 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 COPB2P35606 906 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 WDR4P57081 412 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 UBE2SQ16763 222 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 PTPROQ16827 1216 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 RBM26Q5T8P6 1007 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 TRIM68Q6AZZ1 485 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 RINT1Q6NUQ1 792 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF720Q7Z2F6 126 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 RPUSD2Q8IZ73 545 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 STKLD1Q8NE28 680 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 PTPRN2Q92932 1015 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 SYT15Q9BQS2 421 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 STRA6Q9BX79 667 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 CPVLQ9H3G5 476 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 AGPAT3Q9NRZ7 376 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 SEPT11Q9NVA2 429 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ANKFY1Q9P2R3 1169 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 RGS17Q9UGC6 210 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 POLIQ9UNA4 740 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 THRAP3Q9Y2W1 955 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 CNTNAP4Q9C0A0 1308 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ANKRD63C9JTQ0 380 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ATP2A1O14983 1001 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 MAP3K7O43318 606 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 MAGEC1O60732 1142 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 CSDE1O75534 798 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 RFC4P35249 363 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 MFAP3P55082 362 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 XIAPP98170 497 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 TBCCQ15814 346 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 KYNUQ16719 465 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC142Q17RM4 750 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 CLEC16AQ2KHT3 1053 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 EAPPQ56P03 285 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 C1orf186Q6ZWK4 172 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF365Q70YC5 407 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ENOSF1Q7L5Y1 443 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ARHGAP22Q7Z5H3 698 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF677Q86XU0 584 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 DHX37Q8IY37 1157 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 SRRM1Q8IYB3 904 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 GATA6Q92908 595 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 NUP85Q9BW27 656 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 VPS11Q9H270 941 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 DENND2DQ9H6A0 471 aaPredicted RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 ARHGEF10LQ9HCE6 1279 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 NMRK1Q9NWW6 199 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 TAS2R14Q9NYV8 317 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 TFCP2L1Q9NZI6 479 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 HAO1Q9UJM8 370 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 NOCTQ9UK39 431 aaKnown RBP8.72□□□□□ -1.01
PTPRR-203ENST00000378778 TRIM33Q9UPN9 1127 aa8.72□□□□□ -1.01
PTPRR-203ENST00000378778 PPP1R11O60927 126 aaPredicted RBP8.71□□□□□ -1.01
PTPRR-203ENST00000378778 TJP3O95049 919 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 PIM1P11309 404 aaPredicted RBP8.71□□□□□ -1.01
PTPRR-203ENST00000378778 KLRK1P26718 216 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 MAGEA4P43358 317 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 RAP1GDS1P52306 607 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 GNPTABQ3T906 1256 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 HHATQ5VTY9 493 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 OTUD6AQ7L8S5 288 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 ADGRG6Q86SQ4 1221 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 UHMK1Q8TAS1 419 aaKnown RBP8.71□□□□□ -1.01
PTPRR-203ENST00000378778 STMN2Q93045 179 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 AZIN2Q96A70 460 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 NSL1Q96IY1 281 aa8.71□□□□□ -1.01
PTPRR-203ENST00000378778 GBP5Q96PP8 586 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms