RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 H2AFVQ71UI9 128 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 FAM71AQ8IYT1 594 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 LINC01465Q8N7H1 131 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 OLIG1Q8TAK6 271 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 AGPAT1Q99943 283 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 SELENOOQ9BVL4 669 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 RASSF4Q9H2L5 321 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 IFT122Q9HBG6 1241 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 GJD2Q9UKL4 321 aa20.89■□□□□ 0.94
SSU72-204ENST00000378726 ABT1Q9ULW3 272 aaKnown RBP20.89■□□□□ 0.94
SSU72-204ENST00000378726 SIP14410 1827 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 ZNF865P0CJ78 1059 aaPredicted RBP20.89■□□□□ 0.93
SSU72-204ENST00000378726 GGCXP38435 758 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 TNFSF9P41273 254 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 MBTD1Q05BQ5 628 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 POU5F1BQ06416 359 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 PDE4CQ08493 712 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 SREBF2Q12772 1141 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 CRHR2Q13324 411 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 TMEM132AQ24JP5 1023 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 TDRD10Q5VZ19 366 aaKnown RBP20.89■□□□□ 0.93
SSU72-204ENST00000378726 SHC3Q92529 594 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 NFKBIZQ9BYH8 718 aa20.89■□□□□ 0.93
SSU72-204ENST00000378726 GNEQ9Y223 722 aaKnown RBP20.89■□□□□ 0.93
SSU72-204ENST00000378726 A0A087WZ62 844 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 A6NJR5 290 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 ABLIM1O14639 778 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 OGTO15294 1046 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 B4GALT5O43286 388 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 FAM189A1O60320 539 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 ZC3H11AO75152 810 aaKnown RBP eCLIP20.88■□□□□ 0.93
SSU72-204ENST00000378726 IQCF3P0C7M6 154 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 RGS2P41220 211 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 GRIK4Q16099 956 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 ATF7IP2Q5U623 682 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 CREG2Q8IUH2 290 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 PPP1R16BQ96T49 567 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 CGRRF1Q99675 332 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 FDXACB1Q9BRP7 624 aaPredicted RBP20.88■□□□□ 0.93
SSU72-204ENST00000378726 PTPRHQ9HD43 1115 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 SEPT11Q9NVA2 429 aaKnown RBP20.88■□□□□ 0.93
SSU72-204ENST00000378726 EVPLQ92817 2033 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 BTNL10A8MVZ5 291 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 AGPSO00116 658 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 HLA-DRAP01903 254 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 VTNP04004 478 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 PHKA2P46019 1235 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 IRF5Q13568 498 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 WDR44Q5JSH3 913 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 MARCH8Q5T0T0 291 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 OLFML2BQ68BL8 750 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 GOLGA6L1Q8N7Z2 621 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 PLEKHA4Q9H4M7 779 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 SNX12Q9UMY4 172 aa20.88■□□□□ 0.93
SSU72-204ENST00000378726 TMCO5BA8MYB1 307 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 TNPO2O14787 897 aaKnown RBP20.87■□□□□ 0.93
SSU72-204ENST00000378726 CYP26A1O43174 497 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 CSDE1O75534 798 aaKnown RBP20.87■□□□□ 0.93
SSU72-204ENST00000378726 SGPL1O95470 568 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 PROZP22891 400 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 MPZL3Q6UWV2 235 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 CDR2LQ86X02 465 aaPredicted RBP20.87■□□□□ 0.93
SSU72-204ENST00000378726 BRSK2Q8IWQ3 736 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 ZIC5Q96T25 663 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 INTUQ9ULD6 942 aa20.87■□□□□ 0.93
SSU72-204ENST00000378726 TM4SF4P48230 202 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 GALCP54803 685 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 OR5B17Q8NGF7 314 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 HDAC7Q8WUI4 952 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 SLC20A1Q8WUM9 679 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 PRMT7Q9NVM4 692 aaPredicted RBP20.86■□□□□ 0.93
SSU72-204ENST00000378726 ZNF236Q9UL36 1845 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 PALMO75781 387 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 VNN1O95497 513 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 PIK3CAP42336 1068 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 NOP2P46087 812 aaKnown RBP20.86■□□□□ 0.93
SSU72-204ENST00000378726 GCNT1Q02742 428 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 GRM1Q13255 1194 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 EEF1DP3Q658K8 133 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 THNSL1Q8IYQ7 743 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 FAM212AQ96EL1 285 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 C1orf112Q9NSG2 853 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 SETD4Q9NVD3 440 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 RSPH14Q9UHP6 348 aa20.86■□□□□ 0.93
SSU72-204ENST00000378726 CPSF3Q9UKF6 684 aaKnown RBP20.86■□□□□ 0.93
SSU72-204ENST00000378726 ZNF568Q3ZCX4 644 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 ENOSF1Q7L5Y1 443 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 TLK2Q86UE8 772 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 SLC47A2Q86VL8 602 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 RPUSD2Q8IZ73 545 aaKnown RBP20.85■□□□□ 0.93
SSU72-204ENST00000378726 LENG1Q96BZ8 264 aaPredicted RBP20.85■□□□□ 0.93
SSU72-204ENST00000378726 FAM81BQ96LP2 452 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 ACP6Q9NPH0 428 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 TNFSF13BQ9Y275 285 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 MRPS25P82663 173 aaKnown RBP20.85■□□□□ 0.93
SSU72-204ENST00000378726 PALB2Q86YC2 1186 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 IFNLR1Q8IU57 520 aaPredicted RBP20.85■□□□□ 0.93
SSU72-204ENST00000378726 MMGT1Q8N4V1 131 aa20.85■□□□□ 0.93
SSU72-204ENST00000378726 AENQ8WTP8 325 aaKnown RBP20.85■□□□□ 0.93
SSU72-204ENST00000378726 SOCS4Q8WXH5 440 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms