RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 UBA1P22314 1058 aaKnown RBP15.08■□□□□ 0
SHROOM1-203ENST00000378679 STX2P32856 288 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 ZNF484Q5JVG2 852 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 ASNSD1Q9NWL6 643 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 UVRAGQ9P2Y5 699 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 PABPN1LA6NDY0 278 aaKnown RBP15.08■□□□□ 0
SHROOM1-203ENST00000378679 SART1O43290 800 aaKnown RBP15.08■□□□□ 0
SHROOM1-203ENST00000378679 TMEM253P0C7T8 217 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 KRT3P12035 628 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 ATP11AP98196 1134 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 IFT88Q13099 833 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 SCN4BQ8IWT1 228 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 CCDC13Q8IYE1 715 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 ZNF560Q96MR9 790 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.08■□□□□ 0
SHROOM1-203ENST00000378679 ALG6Q9Y672 507 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 CAPN6Q9Y6Q1 641 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 CSPG5O95196 566 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 TFRCP02786 760 aaKnown RBP15.08■□□□□ 0
SHROOM1-203ENST00000378679 B4GALNT4Q76KP1 1039 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 NOA1Q8NC60 698 aaKnown RBP15.08■□□□□ 0
SHROOM1-203ENST00000378679 RNF139Q8WU17 664 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 TBC1D31Q96DN5 1066 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 MTMR12Q9C0I1 747 aa15.08■□□□□ 0
SHROOM1-203ENST00000378679 A0A087WZ62 844 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ZNF280AP59817 542 aaPredicted RBP15.07■□□□□ 0
SHROOM1-203ENST00000378679 ITKQ08881 620 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 SREBF2Q12772 1141 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 SPIRE2Q8WWL2 714 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 CALR3Q96L12 384 aaKnown RBP15.07■□□□□ 0
SHROOM1-203ENST00000378679 FDXACB1Q9BRP7 624 aaPredicted RBP15.07■□□□□ 0
SHROOM1-203ENST00000378679 PACSIN1Q9BY11 444 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 HEY1Q9Y5J3 304 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 C5P01031 1676 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 GRID2IPA4D2P6 1211 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 RPS6KA5O75582 802 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 IL18RAPO95256 599 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ZBED1O96006 694 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 PDGFRBP09619 1106 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ZNF286BP0CG31 522 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ALDH3A1P30838 453 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 RGS2P41220 211 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 LAMTOR4Q0VGL1 99 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ITGB3BPQ13352 177 aaPredicted RBP15.07■□□□□ 0
SHROOM1-203ENST00000378679 PDCLQ13371 301 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 TFDP2Q14188 446 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 SETDB1Q15047 1291 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 BBS9Q3SYG4 887 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 LRRC55Q6ZSA7 311 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 DNAAF5Q86Y56 855 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 MORC4Q8TE76 937 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 PI4K2BG5E9Z4 385 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 RGS7P49802 495 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 MXRA7P84157 204 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ADCY1Q08828 1119 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 SLMAPQ14BN4 828 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 ZNF571Q7Z3V5 609 aaPredicted RBP15.07■□□□□ 0
SHROOM1-203ENST00000378679 C1orf54Q8WWF1 131 aa15.07■□□□□ 0
SHROOM1-203ENST00000378679 SGPL1O95470 568 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 ITGB3P05106 788 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 MAPTP10636 758 aaKnown RBP15.06■□□□□ 0
SHROOM1-203ENST00000378679 GTF2H1P32780 548 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 CPT1AP50416 773 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 CYP24A1Q07973 514 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 TREML2Q5T2D2 321 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 TMC2Q8TDI7 906 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 COG1Q8WTW3 980 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 THAP2Q9H0W7 228 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 GTPBP10A4D1E9 387 aaKnown RBP15.06■□□□□ 0
SHROOM1-203ENST00000378679 NPTXRO95502 500 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 ACSL3O95573 720 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 KRT7P08729 469 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 IFNAR2P48551 515 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 HSD17B4P51659 736 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 CDK17Q00537 523 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 ARSHQ5FYA8 562 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 GLRA4Q5JXX5 417 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 FBF1Q8TES7 1133 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 ZC3H15Q8WU90 426 aaKnown RBP15.06■□□□□ 0
SHROOM1-203ENST00000378679 SENP7Q9BQF6 1050 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 ABHD16BQ9H3Z7 469 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 TTC7AQ9ULT0 858 aaPredicted RBP15.06■□□□□ 0
SHROOM1-203ENST00000378679 F8VZ95 297 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 CUL2Q13617 745 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 RRP1BQ14684 758 aaKnown RBP15.06■□□□□ 0
SHROOM1-203ENST00000378679 C2CD6Q53TS8 623 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 COPS5Q92905 334 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 HPDLQ96IR7 371 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 TNIP3Q96KP6 325 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 TMEM117Q9H0C3 514 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 SETD4Q9NVD3 440 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 VAV3Q9UKW4 847 aa15.06■□□□□ 0
SHROOM1-203ENST00000378679 DOT1LQ8TEK3 1739 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 VIRMAQ69YN4 1812 aaKnown RBP15.05■□□□□ 0
SHROOM1-203ENST00000378679 PEX10O60683 326 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 GPAT2Q6NUI2 795 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 CCDC137Q6PK04 289 aaKnown RBP15.05■□□□□ 0
SHROOM1-203ENST00000378679 MPZL3Q6UWV2 235 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 SRLQ86TD4 932 aa15.05■□□□□ 0
SHROOM1-203ENST00000378679 THEM5Q8N1Q8 247 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms