RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 RARRES1P49788 294 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 TAF11Q15544 211 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 HAUS6Q7Z4H7 955 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 CCDC105Q8IYK2 499 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 IL31RAQ8NI17 732 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 GDAP1Q8TB36 358 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 KCNV2Q8TDN2 545 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 KREMEN1Q96MU8 473 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 GLIS2Q9BZE0 524 aaPredicted RBP17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 TRIM7Q9C029 511 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 COL20A1Q9P218 1284 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 P4HA2O15460 535 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 PLS3P13797 630 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 MXI1P50539 228 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 ART4Q93070 314 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 GPRC5CQ9NQ84 441 aa17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 NOCTQ9UK39 431 aaKnown RBP17.72■□□□□ 0.43
PCDHA1-201ENST00000378133 ANKRD63C9JTQ0 380 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 H0YIN7 160 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 SLC16A4O15374 487 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 CCNG1P51959 295 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 TCEAL1Q15170 157 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 FAM71AQ8IYT1 594 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 SH3GL3Q99963 347 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 NUP85Q9BW27 656 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 YIPF3Q9GZM5 350 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 WNT8AQ9H1J5 351 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 TMOD2Q9NZR1 351 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 KLHL14Q9P2G3 628 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 YDJCA8MPS7 323 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 DHX15O43143 795 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 SPOPO43791 374 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 CHRNA5P30532 468 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 ABL2P42684 1182 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 PEX3P56589 373 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 VSTM1Q6UX27 236 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 CDAN1Q8IWY9 1227 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 CKAP2Q8WWK9 683 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 CD101Q93033 1021 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 VTI1AQ96AJ9 217 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 CCDC127Q96BQ5 260 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 RMDN2Q96LZ7 410 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 DDX23Q9BUQ8 820 aaKnown RBP17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 PRKAG3Q9UGI9 489 aa17.71■□□□□ 0.43
PCDHA1-201ENST00000378133 ANKRD33BA6NCL7 494 aa17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 ACSL3O95573 720 aa17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 ADRB2P07550 413 aa17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 RASA3Q14644 834 aa17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 ZNF564Q8TBZ8 553 aaPredicted RBP17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 SEMA4DQ92854 862 aa17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 NAF1Q96HR8 494 aaKnown RBP17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 ETNK1Q9HBU6 452 aa17.71■□□□□ 0.42
PCDHA1-201ENST00000378133 GZMAP12544 262 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 COILP38432 576 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 FMO1Q01740 532 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 NSMFQ6X4W1 530 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 TRMT10CQ7L0Y3 403 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 SLC13A5Q86YT5 568 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 CBWD2Q8IUF1 395 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 C12orf56Q8IXR9 622 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 SERPINB12Q96P63 405 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 POP1Q99575 1024 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 CCPG1Q9ULG6 757 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 EIF4E1BA6NMX2 242 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 NFIBO00712 420 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 MAPTP10636 758 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 ATP5DP30049 168 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 QARSP47897 775 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 GTF2BQ00403 316 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 CALCOCO2Q13137 446 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 ALCAMQ13740 583 aa17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 ZC3H12AQ5D1E8 599 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 RAB3IPQ96QF0 476 aaPredicted RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 TGS1Q96RS0 853 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 CDC42EP4Q9H3Q1 356 aaKnown RBP17.7■□□□□ 0.42
PCDHA1-201ENST00000378133 A6NHS1 94 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 FOXO6A8MYZ6 492 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 GGPS1O95749 300 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 GH1P01241 217 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 ALAS1P13196 640 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 CCNB1P14635 433 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 SPP2Q13103 211 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 TNIP1Q15025 636 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 TRIM68Q6AZZ1 485 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 CYFIP1Q7L576 1253 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 FAM160B2Q86V87 743 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 ZNF653Q96CK0 615 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 ZFATQ9P243 1243 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 MTUS1Q9ULD2 1270 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 PASKQ96RG2 1323 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 MTA2O94776 668 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 LINGO3P0C6S8 592 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 YWHABP31946 246 aaKnown RBP17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 STX2P32856 288 aa17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 SPDYE1Q8NFV5 336 aaPredicted RBP17.69■□□□□ 0.42
PCDHA1-201ENST00000378133 ITFG2Q969R8 447 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms