RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 CUL2Q13617 745 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 PLEKHH3Q7Z736 793 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 RASGEF1CQ8N431 466 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 AFG1LQ8WV93 481 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 MAML3Q96JK9 1138 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 IMPG2Q9BZV3 1241 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 STIM2Q9P246 746 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 TMEM59LQ9UK28 342 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 CPSF3Q9UKF6 684 aaKnown RBP18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 GTF3C4Q9UKN8 822 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 PCDHB2Q9Y5E7 798 aa18.79■□□□□ 0.6
NKX2-2-201ENST00000377142 INO80B-WBP1J3KQ70 363 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 TNFSF9P41273 254 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 NOP14P78316 857 aaKnown RBP18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 SEZ6Q53EL9 994 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 ATF7IP2Q5U623 682 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 OR5B17Q8NGF7 314 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 ELMO3Q96BJ8 720 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 INO80BQ9C086 356 aaPredicted RBP18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 CLTAP09496 248 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 TNFRSF8P28908 595 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 PHKA2P46019 1235 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 MBTD1Q05BQ5 628 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 NCOA4Q13772 614 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 PTPROQ16827 1216 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 CLEC16AQ2KHT3 1053 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 CCNI2Q6ZMN8 369 aaPredicted RBP18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 PTPN18Q99952 460 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 RRAGCQ9HB90 399 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 PTPRHQ9HD43 1115 aa18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 PRMT7Q9NVM4 692 aaPredicted RBP18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 NOC2LQ9Y3T9 749 aaKnown RBP18.78■□□□□ 0.6
NKX2-2-201ENST00000377142 PPFIA4O75335 1185 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 CYP1A2P05177 515 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 IGBP1P78318 339 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 CASP8Q14790 479 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 ZNF568Q3ZCX4 644 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 SPOPLQ6IQ16 392 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 ACAD10Q6JQN1 1059 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 LINC01465Q8N7H1 131 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 ZNF653Q96CK0 615 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 ABHD16BQ9H3Z7 469 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 APOBEC3GQ9HC16 384 aaKnown RBP18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 UVRAGQ9P2Y5 699 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 DMGDHQ9UI17 866 aaKnown RBP18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 ANK1P16157 1881 aa18.77■□□□□ 0.6
NKX2-2-201ENST00000377142 SLC15A5A6NIM6 579 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 MIF4GDA9UHW6 222 aaKnown RBP18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 ZMYND10O75800 440 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 GJB1P08034 283 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 ACO1P21399 889 aaKnown RBP18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 GPS2Q13227 327 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 TMEM132AQ24JP5 1023 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 DUSP28Q4G0W2 176 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 IFNLR1Q8IU57 520 aaPredicted RBP18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 TINF2Q9BSI4 451 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 C16orf70Q9BSU1 422 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 UBXN6Q9BZV1 441 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 CARD9Q9H257 536 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 SLC5A4Q9NY91 659 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 TTC7AQ9ULT0 858 aaPredicted RBP18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 TNFSF13BQ9Y275 285 aa18.77■□□□□ 0.59
NKX2-2-201ENST00000377142 CCDC188H7C350 402 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 DDX3YO15523 660 aaKnown RBP18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 ZNF286BP0CG31 522 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 HOXD8P13378 290 aaPredicted RBP18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 FAM187BQ17R55 369 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 HDAC7Q8WUI4 952 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 ACBD3Q9H3P7 528 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 CNTN6Q9UQ52 1028 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 TRPM7Q96QT4 1865 aa18.76■□□□□ 0.59
NKX2-2-201ENST00000377142 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 TMOD1P28289 359 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 RNASE9P60153 205 aaKnown RBP18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 SMC1AQ14683 1233 aaKnown RBP18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 CLUL1Q15846 466 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 DUOXA2Q1HG44 320 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 SMYD5Q6GMV2 418 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 TRIM72Q6ZMU5 477 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 ZNF564Q8TBZ8 553 aaPredicted RBP18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 TRIM11Q96F44 468 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 RPS6KC1Q96S38 1066 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 KRT12Q99456 494 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 VIPAS39Q9H9C1 493 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 NUB1Q9Y5A7 615 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 PCDHB4Q9Y5E5 795 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 ALG6Q9Y672 507 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 FAM170AA1A519 330 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 CLSTN1O94985 981 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 ASS1P00966 412 aaKnown RBP18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 UNGP13051 313 aaPredicted RBP18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 SLC7A5Q01650 507 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 ACVR2BQ13705 512 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 ZBTB10Q96DT7 871 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 NUP85Q9BW27 656 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 MTMR12Q9C0I1 747 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 IFT122Q9HBG6 1241 aa18.75■□□□□ 0.59
NKX2-2-201ENST00000377142 SRCAPQ6ZRS2 3230 aa18.74■□□□□ 0.59
NKX2-2-201ENST00000377142 A0A0U1RQG5 324 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms