RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ECHS1P30084 290 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 SPOPLQ6IQ16 392 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 LEKR1Q6ZMV7 388 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 BTBD6Q96KE9 485 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 FGD4Q96M96 766 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 CNOT8Q9UFF9 292 aaKnown RBP21.67■■□□□ 1.06
VSX1-202ENST00000376709 CLDN3O15551 220 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 ARIH2O95376 493 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 KCTD2Q14681 263 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 ZSCAN26Q16670 478 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 WDR78Q5VTH9 848 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 AADACL2Q6P093 401 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 IQCKQ8N0W5 287 aa21.67■■□□□ 1.06
VSX1-202ENST00000376709 DAPK3O43293 454 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 KRT14P02533 472 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 COPB2P35606 906 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 BPIFB4P59827 614 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 DR1Q01658 176 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 GPR162Q16538 588 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 KCTD19Q17RG1 926 aaPredicted RBP21.66■■□□□ 1.06
VSX1-202ENST00000376709 SEZ6Q53EL9 994 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 SEL1L2Q5TEA6 688 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 KCNV1Q6PIU1 500 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 BBXQ8WY36 941 aaPredicted RBP21.66■■□□□ 1.06
VSX1-202ENST00000376709 MMP19Q99542 508 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 CGRRF1Q99675 332 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 ZNF408Q9H9D4 720 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 ERVK-5Q9HDB9 667 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 ADGRA2Q96PE1 1338 aa21.66■■□□□ 1.06
VSX1-202ENST00000376709 SOCS7O14512 581 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 VNN1O95497 513 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 ACTN2P35609 894 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 HSPA9P38646 679 aaKnown RBP21.65■■□□□ 1.06
VSX1-202ENST00000376709 EFNA5P52803 228 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 HSDL1Q3SXM5 330 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 LDLRAD1Q5T700 205 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 ZNF677Q86XU0 584 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 TCHPQ9BT92 498 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 RAB17Q9H0T7 212 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 CALCOCO1Q9P1Z2 691 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 BHMG1C9JSJ3 638 aaPredicted RBP21.65■■□□□ 1.06
VSX1-202ENST00000376709 POTEJP0CG39 1038 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 PEX5P50542 639 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 POU5F1Q01860 360 aaKnown RBP21.65■■□□□ 1.06
VSX1-202ENST00000376709 CUL2Q13617 745 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 GPR20Q99678 358 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 DPH5Q9H2P9 285 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 FAM114A2Q9NRY5 505 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 PPME1Q9Y570 386 aa21.65■■□□□ 1.06
VSX1-202ENST00000376709 SRGAP2CP0DJJ0 459 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 UNGP13051 313 aaPredicted RBP21.64■■□□□ 1.06
VSX1-202ENST00000376709 HSPA6P17066 643 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 SNAPC2Q13487 334 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 IER5Q5VY09 327 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 ZPBP2Q6X784 338 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 CD101Q93033 1021 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 LRRC45Q96CN5 670 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 TRIM51Q9BSJ1 452 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 NEUROG2Q9H2A3 272 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 CLEC11AQ9Y240 323 aa21.64■■□□□ 1.06
VSX1-202ENST00000376709 IQCA1LA6NCM1 817 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 CYP2C8P10632 490 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 CTNNA1P35221 906 aaKnown RBP21.64■■□□□ 1.05
VSX1-202ENST00000376709 CELF3Q5SZQ8 465 aaKnown RBP21.64■■□□□ 1.05
VSX1-202ENST00000376709 TCP11Q8WWU5 503 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 CPA5Q8WXQ8 436 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 SEC14L1Q92503 715 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 ARL8AQ96BM9 186 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 SLC10A4Q96EP9 437 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 MRPL4Q9BYD3 311 aaKnown RBP21.64■■□□□ 1.05
VSX1-202ENST00000376709 TRIM31Q9BZY9 425 aa21.64■■□□□ 1.05
VSX1-202ENST00000376709 CNTNAP2Q9UHC6 1331 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 MCM3APO60318 1980 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 NSFP46459 744 aaKnown RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 LAMTOR4Q0VGL1 99 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 MXD4Q14582 209 aaPredicted RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 TTMPQ5BVD1 217 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 TMEM270Q6UE05 265 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 ZBTB33Q86T24 672 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 FBXO16Q8IX29 292 aaPredicted RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 OR5B17Q8NGF7 314 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 PIK3R5Q8WYR1 880 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 SPATA33Q96N06 139 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 APOBEC3GQ9HC16 384 aaKnown RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 ANAPC7Q9UJX3 599 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 PCDHB4Q9Y5E5 795 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 DNAJC25-GNG10A0A024R161 153 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 TTLL13PA6NNM8 815 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 TOM1L1O75674 476 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 PYGMP11217 842 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 NOP14P78316 857 aaKnown RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 DHX34Q14147 1143 aaKnown RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 MAP1SQ66K74 1059 aaPredicted RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.63■■□□□ 1.05
VSX1-202ENST00000376709 CPNE8Q86YQ8 564 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 ZBTB8OSQ8IWT0 167 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
VSX1-202ENST00000376709 MCOLN2Q8IZK6 566 aa21.63■■□□□ 1.05
VSX1-202ENST00000376709 LRRC71Q8N4P6 559 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms