RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 DTNAQ9Y4J8 743 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 UBA6A0AVT1 1052 aaPredicted RBP20.83■□□□□ 0.92
COL15A1-201ENST00000375001 RASSF9O75901 435 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 SRP72O76094 671 aaKnown RBP20.83■□□□□ 0.92
COL15A1-201ENST00000375001 ACTR2P61160 394 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 P3H1Q32P28 736 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 GADL1Q6ZQY3 521 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 KLF6Q99612 283 aaPredicted RBP20.83■□□□□ 0.92
COL15A1-201ENST00000375001 BSDC1Q9NW68 430 aaPredicted RBP20.83■□□□□ 0.92
COL15A1-201ENST00000375001 SCN3BQ9NY72 215 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 UBAP1Q9NZ09 502 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 LMCD1Q9NZU5 365 aa20.83■□□□□ 0.92
COL15A1-201ENST00000375001 ATP9BO43861 1147 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 HSPA1AP0DMV8 641 aaKnown RBP20.82■□□□□ 0.92
COL15A1-201ENST00000375001 HSPA1BP0DMV9 641 aaKnown RBP20.82■□□□□ 0.92
COL15A1-201ENST00000375001 TNFAIP1Q13829 316 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 WLSQ5T9L3 541 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 GPR141Q7Z602 305 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 ALX1Q15699 326 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 ANKRD40Q6AI12 368 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 MTERF3Q96E29 417 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 AGBL1Q96MI9 1066 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 PSMC3IPQ9P2W1 217 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-201ENST00000375001 NSMCE4AQ9NXX6 385 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 ZNF609O15014 1411 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 POTECB2RU33 542 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 NQO1P15559 274 aaKnown RBP20.82■□□□□ 0.92
COL15A1-201ENST00000375001 ANGPT1Q15389 498 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 CDKL3Q8IVW4 592 aaPredicted RBP20.82■□□□□ 0.92
COL15A1-201ENST00000375001 DDX56Q9NY93 547 aaKnown RBP20.82■□□□□ 0.92
COL15A1-201ENST00000375001 HSPBP1Q9NZL4 362 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 MAD2L2Q9UI95 211 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 PFASO15067 1338 aa20.82■□□□□ 0.92
COL15A1-201ENST00000375001 RAD51CO43502 376 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 RCAN1P53805 252 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 RASGRP2Q7LDG7 609 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 BTN2A2Q8WVV5 523 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 TSC22D2O75157 780 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 MYO1DO94832 1006 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 SESN2P58004 480 aaPredicted RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 KNOP1Q1ED39 458 aaKnown RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 ABI1Q8IZP0 508 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 DBNDD1Q9H9R9 158 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 AFF4Q9UHB7 1163 aaKnown RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 V9GYQ6 96 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 ANKARQ7Z5J8 1434 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP42Q9H9J4 1324 aaKnown RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L15C9J2P7 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L13C9JLJ4 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L11C9JVI0 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L18D6R9N7 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L22D6RA61 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L17D6RBQ6 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L19D6RCP7 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L20D6RJB6 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 E7ENQ6 273 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L24Q0WX57 530 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 USP17L6PQ6QN14 398 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 TRIM45Q9H8W5 580 aaPredicted RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 NDUFA13Q9P0J0 144 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 ADCY10Q96PN6 1610 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 MKRN4PQ13434 485 aaPredicted RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 NR1I3Q14994 352 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 LVRNQ6Q4G3 990 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 LRRC34Q8IZ02 419 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 OTUB1Q96FW1 271 aaPredicted RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 NDEL1Q9GZM8 345 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 PCMTD2Q9NV79 361 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 PPEF1O14829 653 aaPredicted RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 PHF2O75151 1096 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 MYBL1P10243 752 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 PLA2G4AP47712 749 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 FOXO4P98177 505 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 HPS3Q969F9 1004 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.81■□□□□ 0.92
COL15A1-201ENST00000375001 SESN1Q9Y6P5 492 aa20.81■□□□□ 0.92
COL15A1-201ENST00000375001 TARBP1Q13395 1621 aaKnown RBP20.8■□□□□ 0.92
COL15A1-201ENST00000375001 LDHAP00338 332 aaKnown RBP20.8■□□□□ 0.92
COL15A1-201ENST00000375001 GSNP06396 782 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 GNA15P30679 374 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 PDXDC2PQ6P474 469 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 DDI1Q8WTU0 396 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 DCP1AQ9NPI6 582 aaPredicted RBP20.8■□□□□ 0.92
COL15A1-201ENST00000375001 AP4S1Q9Y587 144 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 ATP8B3O60423 1300 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 CFAP74Q9C0B2 1584 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 ABHD8Q96I13 439 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 CNDP1Q96KN2 507 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 NLRP4Q96MN2 994 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 MMTAG2Q9BU76 263 aaKnown RBP20.8■□□□□ 0.92
COL15A1-201ENST00000375001 TRIM8Q9BZR9 551 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 KLHL11Q9NVR0 708 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 PSAPP07602 524 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 WASHC5Q12768 1159 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 TRIM25Q14258 630 aaKnown RBP20.8■□□□□ 0.92
COL15A1-201ENST00000375001 P3H2Q8IVL5 708 aa20.8■□□□□ 0.92
COL15A1-201ENST00000375001 USE1Q9NZ43 259 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms