RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 BCL7CQ8WUZ0 217 aaPredicted RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SCFD1Q8WVM8 642 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TMEM169Q96HH4 297 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PPP1R9BQ96SB3 815 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SRRTQ9BXP5 876 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MRPL9Q9BYD2 267 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IRF2BPLQ9H1B7 796 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 C17orf75Q9HAS0 396 aa11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SAMSN1Q9NSI8 373 aaKnown RBP11.95□□□□□ -0.5
HLA-DQA1-202ENST00000374949 A0A0U1RQF3 1178 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PRR23AA6NEV1 266 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EIF3DO15371 548 aaKnown RBP eCLIP11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CBFA2T2O43439 604 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MAFO75444 373 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GCNT3O95395 438 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SERPINC1P01008 464 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MYBP10242 640 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZNF18P17022 549 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TMOD1P28289 359 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NMT1P30419 496 aaKnown RBP11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MTHFRP42898 656 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZNF75DP51815 510 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NUBP1P53384 320 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SMTNP53814 917 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PMS1P54277 932 aaKnown RBP11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FANCCQ00597 558 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 LRRC63Q05C16 580 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 KNOP1Q1ED39 458 aaKnown RBP11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CDKAL1Q5VV42 579 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 KIAA1841Q6NSI8 718 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TTI2Q6NXR4 508 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 VPS52Q8N1B4 723 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CSGALNACT2Q8N6G5 542 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SLC7A3Q8WY07 619 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 LPPQ93052 612 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZBP1Q9H171 429 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 THAP9Q9H5L6 903 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DZANK1Q9NVP4 752 aa11.94□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TRIM49BA6NDI0 452 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PROB1E7EW31 1015 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PDXKO00764 312 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PRPF6O94906 941 aaKnown RBP11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CXCL14O95715 111 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ATP1A3P13637 1013 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ALDH7A1P49419 539 aaKnown RBP11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 UBASH3AP57075 661 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SPAG1Q07617 926 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TBC1D8BQ0IIM8 1120 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ALCAMQ13740 583 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EMC2Q15006 297 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FRMD5Q7Z6J6 570 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FAM114A1Q8IWE2 563 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ANKRD20A12PQ8NF67 263 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PDLIM2Q96JY6 352 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IFT74Q96LB3 600 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FIZ1Q96SL8 496 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 JPH2Q9BR39 696 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NTPCRQ9BSD7 190 aaKnown RBP11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 STRA6Q9BX79 667 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FGFBP2Q9BYJ0 223 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MFSD1Q9H3U5 465 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ST6GALNAC4Q9H4F1 302 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DHX33Q9H6R0 707 aaKnown RBP11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GPRC5CQ9NQ84 441 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 XPNPEP1Q9NQW7 623 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IFNKQ9P0W0 207 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MAGEC2Q9UBF1 373 aaPredicted RBP11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 LIMD1Q9UGP4 676 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 INPP5FQ9Y2H2 1132 aa11.93□□□□□ -0.5
HLA-DQA1-202ENST00000374949 UBE4BO95155 1302 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DMDP11532 3685 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 LRRC10BA6NIK2 292 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CCDC169A6NNP5 214 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MEIS3P2A8K0S8 358 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 H0YCG3 227 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CALUO43852 315 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 B4GALT3O60512 393 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EOMESO95936 686 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ARL2P36404 184 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NBL1P41271 181 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PHKA2P46019 1235 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CASP5P51878 434 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PEX3P56589 373 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CWF19L1Q69YN2 538 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ASTLQ6HA08 431 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TWF2Q6IBS0 349 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TMC5Q6UXY8 1006 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PPP4R3CPQ6ZMV5 832 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZDHHC14Q8IZN3 488 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FLCNQ8NFG4 579 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms