RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 LMO3Q8TAP4 145 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 IQCDQ96DY2 449 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 LPIN3Q9BQK8 851 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 EDEM3Q9BZQ6 932 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 RGS7P49802 495 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 ZNF200P98182 395 aaPredicted RBP12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 FMO1Q01740 532 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 NFX1Q12986 1120 aaKnown RBP12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 METTL7BQ6UX53 244 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 RNF10Q8N5U6 811 aaKnown RBP12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 NETO2Q8NC67 525 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 MSANTD4Q8NCY6 345 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 UBA3Q8TBC4 463 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 ACBD3Q9H3P7 528 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 ASIC3Q9UHC3 531 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 AGTPBP1Q9UPW5 1226 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 SSC5DA1L4H1 1573 aa12.78□□□□□ -0.36
TMEM38B-202ENST00000374692 GOLGA6CA6NDK9 693 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 FOXO6A8MYZ6 492 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 GOLGA6DP0CG33 693 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 PYGMP11217 842 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 LACTBP83111 547 aaPredicted RBP12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 TTLL4Q14679 1199 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 DPY19L2P1Q6NXN4 242 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 FOXR1Q6PIV2 292 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 NT5DC3Q86UY8 548 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 TRIM6Q9C030 488 aaPredicted RBP12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 MLXIPLQ9NP71 852 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 GOLGA6AQ9NYA3 693 aa12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 SAE1Q9UBE0 346 aaPredicted RBP12.77□□□□□ -0.36
TMEM38B-202ENST00000374692 FOCADQ5VW36 1801 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 MYO1FO00160 1098 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 CCDC125Q86Z20 511 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 GPRC5AQ8NFJ5 357 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 NEUROG2Q9H2A3 272 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 HPCAL4Q9UM19 191 aa12.77□□□□□ -0.37
TMEM38B-202ENST00000374692 ANKRD62A6NC57 917 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 ERLIN2O94905 339 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 ITGB3P05106 788 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 TCF4P15884 667 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 CHRNB2P17787 502 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 AKAP5P24588 427 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 ZNF699Q32M78 642 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 SEL1L2Q5TEA6 688 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 NIPA1Q7RTP0 329 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 KIAA0319LQ8IZA0 1049 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 HELQQ8TDG4 1101 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 OSMRQ99650 979 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 CXCL16Q9H2A7 254 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 GOLGA8MH3BSY2 632 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 CTNNA1P35221 906 aaKnown RBP12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 CCDC38Q502W7 563 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 SYN2Q92777 582 aaPredicted RBP12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 GPR20Q99678 358 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 PJA2O43164 708 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 HCRTO43612 131 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 EXTL3O43909 919 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 RABGGTBP53611 331 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 RPL7AP62424 266 aaKnown RBP12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 PDCLQ13371 301 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 CCL14Q16627 93 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 PCDHGC5Q9Y5F6 944 aa12.76□□□□□ -0.37
TMEM38B-202ENST00000374692 SPDYE5A6NIY4 337 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 IQCF3P0C7M6 154 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 ZNF157P51786 506 aaPredicted RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MGARPQ8TDB4 240 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MCEEQ96PE7 176 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 GOLGA6L10A0A0M3HER8 536 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 STBD1O95210 358 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 NFICP08651 508 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 PDGFRBP09619 1106 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 FDX1P10109 184 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 CTNNA2P26232 953 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 PAN2Q504Q3 1202 aaKnown RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 UBL4BQ8N7F7 174 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 ZIM3Q96PE6 472 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MPHOSPH6Q99547 160 aaKnown RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MRPL4Q9BYD3 311 aaKnown RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MCM3APO60318 1980 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MAFGO15525 162 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 CNMDO75829 334 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 MYL3P08590 195 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 IFRD2Q12894 506 aaPredicted RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 SYCE1Q8N0S2 351 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 BRI3BPQ8WY22 251 aa12.75□□□□□ -0.37
TMEM38B-202ENST00000374692 ARHGAP28Q9P2N2 729 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms