RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ATP6V0A4Q9HBG4 840 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 SLC12A6Q9UHW9 1150 aa18.24■□□□□ 0.51
RXRB-201ENST00000374680 A0A087WUV0 522 aaPredicted RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 K7ERI5 159 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 RGS16O15492 202 aaPredicted RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 TBK1Q9UHD2 729 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 GTF3C4Q9UKN8 822 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 AGO2Q9UKV8 859 aaKnown RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 ZNF541Q9H0D2 1346 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 STBD1O95210 358 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 EDN1P05305 212 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 CREB1P16220 341 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 ATP4AP20648 1035 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 KRT17Q04695 432 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 STRN3Q13033 797 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 BRDTQ58F21 947 aaPredicted RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 EFCAB13Q8IY85 973 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 DEPTORQ8TB45 409 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 MRRFQ96E11 262 aaKnown RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 MFSD14AQ96MC6 490 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 CYP39A1Q9NYL5 469 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 DIS3Q9Y2L1 958 aaKnown RBP18.23■□□□□ 0.51
RXRB-201ENST00000374680 PCDHA3Q9Y5H8 950 aa18.23■□□□□ 0.51
RXRB-201ENST00000374680 CHN1P15882 459 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 CHKAP35790 457 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 PSMC4P43686 418 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 NSFP46459 744 aaKnown RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 DHX34Q14147 1143 aaKnown RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 EMC2Q15006 297 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 B4GALNT4Q76KP1 1039 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 SEC14L1Q92503 715 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 CD101Q93033 1021 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 HAUS1Q96CS2 278 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 RPS6KC1Q96S38 1066 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 MTFR1LQ9H019 292 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 GGT7Q9UJ14 662 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 FAM187AA6NFU0 413 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 DGAT1O75907 488 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 CYP1A2P05177 515 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 SRGAP2CP0DJJ0 459 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 SF3B2Q13435 895 aaKnown RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 MTM1Q13496 603 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 CLEC16AQ2KHT3 1053 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 MMS22LQ6ZRQ5 1243 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 CAPN12Q6ZSI9 719 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 PPP1R16BQ96T49 567 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 APOBEC3GQ9HC16 384 aaKnown RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 CTNNAL1Q9UBT7 734 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 DOCK5Q9H7D0 1870 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 BHMG1C9JSJ3 638 aaPredicted RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 ECEL1O95672 775 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 DSG3P32926 999 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 CALCOCO2Q13137 446 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 SPRED3Q2MJR0 410 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 SCARA5Q6ZMJ2 495 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 SCYL3Q8IZE3 742 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 TRPM4Q8TD43 1214 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.22■□□□□ 0.51
RXRB-201ENST00000374680 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 MSTO1Q9BUK6 570 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 ST6GALNAC4Q9H4F1 302 aa18.22■□□□□ 0.51
RXRB-201ENST00000374680 RBAKQ9NYW8 714 aaPredicted RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 DDX20Q9UHI6 824 aaKnown RBP18.22■□□□□ 0.51
RXRB-201ENST00000374680 FAM107AO95990 144 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 RALAP11233 206 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 KRT10P13645 584 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 TCF4P15884 667 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 CTNNA2P26232 953 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 TNFSF9P41273 254 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 MCOLN2Q8IZK6 566 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
RXRB-201ENST00000374680 MEFVO15553 781 aaPredicted RBP18.21■□□□□ 0.51
RXRB-201ENST00000374680 THAP12O43422 761 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 SIX1Q15475 284 aaPredicted RBP18.21■□□□□ 0.51
RXRB-201ENST00000374680 KYNUQ16719 465 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 TRIM50Q86XT4 487 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 CABS1Q96KC9 395 aa18.21■□□□□ 0.51
RXRB-201ENST00000374680 RBBP6Q7Z6E9 1792 aaKnown RBP18.2■□□□□ 0.5
RXRB-201ENST00000374680 MROH7Q68CQ1 1323 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
RXRB-201ENST00000374680 GJB1P08034 283 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 ADCY8P40145 1251 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 TAS2R40P59535 323 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 WDR78Q5VTH9 848 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 ABHD15Q6UXT9 468 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 ADAM22Q9P0K1 906 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 COQ4Q9Y3A0 265 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 CST3P01034 146 aaPredicted RBP18.2■□□□□ 0.5
RXRB-201ENST00000374680 GLRA2P23416 452 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 ANKS1BQ7Z6G8 1248 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 LRRC71Q8N4P6 559 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 ANKRD42Q8N9B4 389 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 MCPH1Q8NEM0 835 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 GPRASP2Q96D09 838 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 ZNF302Q9NR11 478 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
RXRB-201ENST00000374680 VNN1O95497 513 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms