RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NLGN2Q8NFZ4 835 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 CCHCR1Q8TD31 782 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 SLCO2A1Q92959 643 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 SLC10A4Q96EP9 437 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 WNK4Q96J92 1243 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 WDR90Q96KV7 1748 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 GPR20Q99678 358 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 LRRC1Q9BTT6 524 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 MSTO1Q9BUK6 570 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 RBAKQ9NYW8 714 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 CWC15Q9P013 229 aaKnown RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 BTBD7Q9P203 1132 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 CTTNBP2NLQ9P2B4 639 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 CEP83Q9Y592 693 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 PCDHA3Q9Y5H8 950 aa9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 COL11A1P12107 1806 aaPredicted RBP9.35□□□□□ -0.91
SNRNP40-202ENST00000373720 ARID2Q68CP9 1835 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 RRN3P2A6NIE6 340 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 LRRIQ4A6NIV6 560 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 MED7O43513 233 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CEP104O60308 925 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 B4GALT4O60513 344 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 GH1P01241 217 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 ATP4AP20648 1035 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 POLR2BP30876 1174 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CTNNA1P35221 906 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 PHKA2P46019 1235 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 FNTAP49354 379 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CDR1P51861 262 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 RWDD2BP57060 319 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 SNX16P57768 344 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 ERVK-9P63128 1117 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 DLG4P78352 724 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 SP2Q02086 613 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 MAP2K1Q02750 393 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CAV1Q03135 178 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CENPCQ03188 943 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CLEC16AQ2KHT3 1053 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 LRRC38Q5VT99 294 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 RUFY4Q6ZNE9 571 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 SEPT14Q6ZU15 432 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 RPUSD2Q8IZ73 545 aaKnown RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 GRK7Q8WTQ7 553 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 GLG1Q92896 1179 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 FAM213AQ9BRX8 229 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 FRMD8P1Q9BZ68 369 aaPredicted RBP9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 FOXP3Q9BZS1 431 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 FZD8Q9H461 694 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 ASB7Q9H672 318 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 GPRC5CQ9NQ84 441 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 RBPJLQ9UBG7 517 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 PCYOX1Q9UHG3 505 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 STRIP2Q9ULQ0 834 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 TNFSF13BQ9Y275 285 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 ALG6Q9Y672 507 aa9.34□□□□□ -0.91
SNRNP40-202ENST00000373720 PTPRFP10586 1907 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 GOLGA6L10A6NI86 522 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ZNF185O15231 689 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 BUB1BO60566 1050 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 MSCO60682 206 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 PHACTR2O75167 634 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 RPS6KA5O75582 802 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CNMDO75829 334 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 SASH3O75995 380 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 HEXIM1O94992 359 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 FTCDO95954 541 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CYP1A1P04798 512 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CALB1P05937 261 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 IVLP07476 585 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ADRB2P07550 413 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 WEE2P0C1S8 567 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 MCF2P10911 925 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 UNGP13051 313 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 PROZP22891 400 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 EIF4BP23588 611 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 MAPK4P31152 587 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 NSFP46459 744 aaKnown RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 COPS2P61201 443 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CUL2Q13617 745 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 TTLL12Q14166 644 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ACAP1Q15027 740 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 STILQ15468 1287 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 CYP1B1Q16678 543 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 C9orf131Q5VYM1 1079 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 IQSEC1Q6DN90 963 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 SLC39A4Q6P5W5 647 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 MPZL3Q6UWV2 235 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 ZNF410Q86VK4 478 aa9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 PHF13Q86YI8 300 aaPredicted RBP9.33□□□□□ -0.92
SNRNP40-202ENST00000373720 KSR1Q8IVT5 923 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms