RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ITGA4P13612 1032 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 IGFBP6P24592 240 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-204ENST00000373560 MFAP1P55081 439 aaKnown RBP13.74□□□□□ -0.21
HDAC8-204ENST00000373560 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 GPR65Q8IYL9 337 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 CCDC82Q8N4S0 544 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 ZNF577Q9BSK1 485 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 COLEC11Q9BWP8 271 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 APOL6Q9BWW8 343 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 CHMP4BQ9H444 224 aaKnown RBP13.74□□□□□ -0.21
HDAC8-204ENST00000373560 TMEM9BQ9NQ34 198 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 TRPV5Q9NQA5 729 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 SUCLA2Q9P2R7 463 aaPredicted RBP13.74□□□□□ -0.21
HDAC8-204ENST00000373560 RAXQ9Y2V3 346 aa13.74□□□□□ -0.21
HDAC8-204ENST00000373560 TNRC6BQ9UPQ9 1833 aaKnown RBP13.74□□□□□ -0.21
HDAC8-204ENST00000373560 APC2O95996 2303 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 ADAMTS9Q9P2N4 1935 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 MOSPD3O75425 235 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 STBD1O95210 358 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 KIF4AO95239 1232 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 GJA1P17302 382 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 PSMC3P17980 439 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 CREMQ03060 361 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 CCINQ13939 588 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 PON2Q15165 354 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 ADGRD1Q6QNK2 874 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 NIPA1Q7RTP0 329 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 ZNF410Q86VK4 478 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 MDM1Q8TC05 714 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 IGDCC4Q8TDY8 1250 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 SNTG2Q9NY99 539 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 SEPT9Q9UHD8 586 aaPredicted RBP13.73□□□□□ -0.21
HDAC8-204ENST00000373560 MYO16Q9Y6X6 1858 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 PCNX2A6NKB5 2137 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 CFAP46Q8IYW2 2715 aa13.73□□□□□ -0.21
HDAC8-204ENST00000373560 SHROOM3Q8TF72 1996 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 ABCA7Q8IZY2 2146 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 SPECC1L-ADORA2AF8WAN1 911 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 CTHP32929 405 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 ZNF76P36508 570 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 SIM1P81133 766 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-204ENST00000373560 C19orf57Q0VDD7 668 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 FAM171A1Q5VUB5 890 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 GPIHBP1Q8IV16 184 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 SMAP1Q8IYB5 467 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-204ENST00000373560 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-204ENST00000373560 CRYGNQ8WXF5 182 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 CORO1BQ9BR76 489 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 TTPALQ9BTX7 342 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
HDAC8-204ENST00000373560 SAMM50Q9Y512 469 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 THADAQ6YHU6 1953 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 MYO18BQ8IUG5 2567 aa13.72□□□□□ -0.21
HDAC8-204ENST00000373560 SF3B1O75533 1304 aaKnown RBP eCLIP13.71□□□□□ -0.212e-6■■■■■ 98.5
HDAC8-204ENST00000373560 FAM221BA6H8Z2 402 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 ZNF263O14978 683 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 TADA2AO75478 443 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 CYP21A2P08686 494 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 OR1D2P34982 312 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 CLK2P49760 499 aaKnown RBP13.71□□□□□ -0.21
HDAC8-204ENST00000373560 PROX2Q3B8N5 592 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 GJA10Q969M2 543 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 ZFYVE19Q96K21 471 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 HHIPQ96QV1 700 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 CXCL16Q9H2A7 254 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 RIC8AQ9NPQ8 531 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-204ENST00000373560 KLK14Q9P0G3 267 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 INVSQ9Y283 1065 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 ZNF462Q96JM2 2506 aa13.71□□□□□ -0.21
HDAC8-204ENST00000373560 ARID2Q68CP9 1835 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 ERICH2A1L162 156 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 HEPACAM2A8MVW5 462 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 MEFVO15553 781 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-204ENST00000373560 CHMP2AO43633 222 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 DDAH1O94760 285 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 AKAP5P24588 427 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 KPNA1P52294 538 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-204ENST00000373560 IRX4P78413 519 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 HNRNPUQ00839 825 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDAC8-204ENST00000373560 RAB33AQ14088 237 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 HSP90AA2PQ14568 343 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-204ENST00000373560 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 SMARCD2Q92925 531 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 LENG9Q96B70 501 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 HNRNPABQ99729 332 aaKnown RBP13.7□□□□□ -0.22
HDAC8-204ENST00000373560 INO80BQ9C086 356 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-204ENST00000373560 NRBP2Q9NSY0 501 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 GTSE1Q9NYZ3 720 aa13.7□□□□□ -0.22
HDAC8-204ENST00000373560 WDR64B1ANS9 1081 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 AKAP3O75969 853 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 ADCY7P51828 1080 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms