RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 PALM2Q8IXS6 379 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 GRK7Q8WTQ7 553 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.35
NCDN-202ENST00000373243 KLF6Q99612 283 aaPredicted RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 SCOCQ9UIL1 159 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 SUPT3HO75486 399 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 LCA5LO95447 670 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 SOX10P56693 466 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 PTENP60484 403 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 OSTNP61366 133 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 TMED1Q13445 227 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 RASA3Q14644 834 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 AOC3Q16853 763 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 TMEM270Q6UE05 265 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 SCYL3Q8IZE3 742 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ANKRD35Q8N283 1001 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 CCT6BQ92526 530 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 NDNQ99608 321 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ABCF3Q9NUQ8 709 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ASTN1O14525 1302 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 MYH6P13533 1939 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 MEIS2O14770 477 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 AGTP01019 485 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 TM4SF1P30408 202 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 BBS9Q3SYG4 887 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 SCARA5Q6ZMJ2 495 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 SLC13A5Q86YT5 568 aaPredicted RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 CERS5Q8N5B7 392 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ATP8B4Q8TF62 1192 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ZSWIM1Q9BR11 485 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 FAM129AQ9BZQ8 928 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 A0A0G2JND7 137 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 PIAS1O75925 651 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 KRT1P04264 644 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 FAM200BP0CF97 657 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 SPATA31C1P0DKV0 1188 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 NQO1P15559 274 aaKnown RBP12.84□□□□□ -0.35
NCDN-202ENST00000373243 ITGA8P53708 1063 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 DNAJC3Q13217 504 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 MYBPC3Q14896 1274 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 PHLDB3Q6NSJ2 640 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 ZNF720Q7Z2F6 126 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 PRUNE1Q86TP1 453 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 CPNE8Q86YQ8 564 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 ANKMY2Q8IV38 441 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 STMN2Q93045 179 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 CDC42EP4Q9H3Q1 356 aaKnown RBP12.84□□□□□ -0.35
NCDN-202ENST00000373243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.35
NCDN-202ENST00000373243 LNPEPQ9UIQ6 1025 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 USP15Q9Y4E8 981 aaPredicted RBP12.84□□□□□ -0.35
NCDN-202ENST00000373243 MYH13Q9UKX3 1938 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 DTNBP1Q96EV8 351 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 IWS1Q96ST2 819 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
NCDN-202ENST00000373243 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 SLITRK3O94933 977 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 PLS3P13797 630 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 TRPC3Q13507 836 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 MTMR1Q13613 665 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 BSPRYQ5W0U4 402 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.84□□□□□ -0.35
NCDN-202ENST00000373243 L3MBTL3Q96JM7 780 aaPredicted RBP12.84□□□□□ -0.35
NCDN-202ENST00000373243 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 WNT8AQ9H1J5 351 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 UNC45AQ9H3U1 944 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 GGA2Q9UJY4 613 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
NCDN-202ENST00000373243 CFAP73A6NFT4 308 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 TGFB1I1O43294 461 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 RARAP10276 462 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 ACOT2P49753 483 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 MREGQ8N565 214 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 DEPTORQ8TB45 409 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 RSAD2Q8WXG1 361 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 ZWILCHQ9H900 591 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 COL18A1P39060 1754 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 UTRNP46939 3433 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
NCDN-202ENST00000373243 IRX4P78413 519 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 GPS1Q13098 491 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 KRT39Q6A163 491 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 TEX9Q8N6V9 391 aa12.83□□□□□ -0.36
NCDN-202ENST00000373243 SLC5A5Q92911 643 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms