RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TRAPPC3O43617 180 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 JAK2O60674 1132 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 ECI2O75521 394 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 LIG1P18858 919 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 MAGEA9P43362 315 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 CLCNKBP51801 687 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 ORC2Q13416 577 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 PUM1Q14671 1186 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 UPP1Q16831 310 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 NT5DC1Q5TFE4 455 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 NPAS3Q8IXF0 933 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 CLDN23Q96B33 292 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 IFT74Q96LB3 600 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 AVENQ9NQS1 362 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 SPATA6Q9NWH7 488 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 HCFC1R1Q9NWW0 138 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 GDE1Q9NZC3 331 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 CDY1Q9Y6F8 540 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 TPRP12270 2363 aaKnown RBP14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 FRYLO94915 3013 aa14.4□□□□□ -0.1
TRAPPC3-201ENST00000373159 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 LAMTOR5O43504 91 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 KINO60870 393 aaKnown RBP14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 SAFBQ15424 915 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 ZBTB41Q5SVQ8 909 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 ATF7IP2Q5U623 682 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 SLC8B1Q6J4K2 584 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 ALKAL1Q6UXT8 129 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 DGLUCYQ7Z3D6 616 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 APBB1IPQ7Z5R6 666 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 DCLK2Q8N568 766 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 ZNF461Q8TAF7 563 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 KIFAP3Q92845 792 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 DDX27Q96GQ7 796 aaKnown RBP14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 KXD1Q9BQD3 176 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 LTB4R2Q9NPC1 389 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 TNFSF13BQ9Y275 285 aa14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 MRPS23Q9Y3D9 190 aaKnown RBP14.39□□□□□ -0.11
TRAPPC3-201ENST00000373159 SPTBN2O15020 2390 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 ARHGEF37A1IGU5 675 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 K7ERI5 159 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 SPTLC1O15269 473 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 ABLIM3O94929 683 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 RHOP08100 348 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 OR52Z1P0C646 297 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 PTPN2P17706 415 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 CD72P21854 359 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 TKTP29401 623 aaKnown RBP14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 FOSBP53539 338 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 UBXN2BQ14CS0 331 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 ZNF174Q15697 407 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 XKR4Q5GH76 650 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 GLRA4Q5JXX5 417 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 NELL1Q92832 810 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 MCRS1Q96EZ8 462 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 HINFPQ9BQA5 517 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 KIFC3Q9BVG8 833 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 POLD4Q9HCU8 107 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 DLL3Q9NYJ7 618 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 PCDHGA2Q9Y5H1 932 aa14.38□□□□□ -0.11
TRAPPC3-201ENST00000373159 NCAM2O15394 837 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 TBC1D4O60343 1298 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 MICAL2O94851 1124 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 GRM5P41594 1212 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 BRCC3P46736 316 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 RPS9P46781 194 aaKnown RBP14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 NEK4P51957 841 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 CSTF1Q05048 431 aaKnown RBP14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 ECM1Q16610 540 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 SLC5A9Q2M3M2 681 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 HAUS3Q68CZ6 603 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 POTEHQ6S545 545 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 ZNF852Q6ZMS4 543 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 ZBTB44Q8NCP5 570 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 C3orf58Q8NDZ4 430 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 ATRIPQ8WXE1 791 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 ING5Q8WYH8 240 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 PLA2G2FQ9BZM2 168 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 BHMT2Q9H2M3 363 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 FOXP1Q9H334 677 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 GOLGA2P5Q9HBQ8 144 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 PTPRHQ9HD43 1115 aa14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 TOPORSQ9NS56 1045 aaPredicted RBP14.37□□□□□ -0.11
TRAPPC3-201ENST00000373159 FANCMQ8IYD8 2048 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 NOTCH4Q99466 2003 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 MED19A0JLT2 244 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 I3L4J1 428 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 ATF2P15336 505 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 ELF1P32519 619 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 YARSP54577 528 aaKnown RBP14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 ROR1Q01973 937 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 GUCY1B3Q02153 619 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 ST3GAL1Q11201 340 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 FZD5Q13467 585 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 MRPL58Q14197 206 aaKnown RBP14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 PDIA5Q14554 519 aa14.36□□□□□ -0.11
TRAPPC3-201ENST00000373159 TANGO2Q6ICL3 276 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms