RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 ASTE1Q2TB18 679 aaPredicted RBP17.35■□□□□ 0.37
C9orf78-201ENST00000372447 DPY19L2P1Q6NXN4 242 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 SLC9A9Q8IVB4 645 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 SYCP3Q8IZU3 236 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 SLC17A8Q8NDX2 589 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 KCNN1Q92952 543 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 TMEM206Q9H813 350 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 FRMD4BQ9Y2L6 1034 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 PCDHA13Q9Y5I0 950 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 PDE4DIPQ5VU43 2346 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 GTPBP10A4D1E9 387 aaKnown RBP17.35■□□□□ 0.37
C9orf78-201ENST00000372447 H0YCG3 227 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 ACKR2O00590 384 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 TSPAN1O60635 241 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 PRKCBP05771 671 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 SLC9A1P19634 815 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 PON1P27169 355 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 HOXA11P31270 313 aaPredicted RBP17.35■□□□□ 0.37
C9orf78-201ENST00000372447 MAGEA10P43363 369 aaPredicted RBP17.35■□□□□ 0.37
C9orf78-201ENST00000372447 CYP2J2P51589 502 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 MYBPC2Q14324 1141 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 PCBP1Q15365 356 aaKnown RBP eCLIP17.35■□□□□ 0.37
C9orf78-201ENST00000372447 FAM187BQ17R55 369 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 GBP6Q6ZN66 633 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 SEPT8Q92599 483 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 PRMT7Q9NVM4 692 aaPredicted RBP17.35■□□□□ 0.37
C9orf78-201ENST00000372447 AIPL1Q9NZN9 384 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 TBX20Q9UMR3 447 aa17.35■□□□□ 0.37
C9orf78-201ENST00000372447 ERLIN2O94905 339 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 PFKMP08237 780 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 ACTN1P12814 892 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 RAPGEF1Q13905 1077 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 TDRD12Q587J7 1177 aaKnown RBP17.34■□□□□ 0.37
C9orf78-201ENST00000372447 KLHDC7AQ5VTJ3 777 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 GPIHBP1Q8IV16 184 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 ACCSQ96QU6 501 aa17.34■□□□□ 0.37
C9orf78-201ENST00000372447 UCHL3P15374 230 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 ARF4P18085 180 aaPredicted RBP17.33■□□□□ 0.37
C9orf78-201ENST00000372447 CNKSR3Q6P9H4 555 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 ZNF365Q70YC5 407 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 RTN4RL1Q86UN2 441 aaPredicted RBP17.33■□□□□ 0.37
C9orf78-201ENST00000372447 CEP112Q8N8E3 955 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 APBB2Q92870 758 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 CPB2Q96IY4 423 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 PIN4Q9Y237 131 aaKnown RBP17.33■□□□□ 0.37
C9orf78-201ENST00000372447 DUSP10Q9Y6W6 482 aa17.33■□□□□ 0.37
C9orf78-201ENST00000372447 RANBP2P49792 3224 aaKnown RBP17.33■□□□□ 0.36
C9orf78-201ENST00000372447 MGEA5O60502 916 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 SCP2P22307 547 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 GFPT1Q06210 699 aaPredicted RBP17.33■□□□□ 0.36
C9orf78-201ENST00000372447 STRN3Q13033 797 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
C9orf78-201ENST00000372447 TMEM240Q5SV17 173 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 TMEM174Q8WUU8 243 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.33■□□□□ 0.36
C9orf78-201ENST00000372447 GCNT4Q9P109 453 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 FBXL5Q9UKA1 691 aa17.33■□□□□ 0.36
C9orf78-201ENST00000372447 A0A1B0GUA9 196 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 EXOC3O60645 756 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 FGBP02675 491 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 MAGEA1P43355 309 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 AMPD2Q01433 879 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 DSC3Q14574 896 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 ASIC2Q16515 512 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 RSRC2Q7L4I2 434 aaKnown RBP17.32■□□□□ 0.36
C9orf78-201ENST00000372447 OTOP2Q7RTS6 562 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 CDR2LQ86X02 465 aaPredicted RBP17.32■□□□□ 0.36
C9orf78-201ENST00000372447 MAP4K3Q8IVH8 894 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 TXLNBQ8N3L3 684 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 SECISBP2LQ93073 1101 aaKnown RBP17.32■□□□□ 0.36
C9orf78-201ENST00000372447 GDF15Q99988 308 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 TARS2Q9BW92 718 aaKnown RBP17.32■□□□□ 0.36
C9orf78-201ENST00000372447 SIX2Q9NPC8 291 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 CHST12Q9NRB3 414 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 MYO6Q9UM54 1294 aa17.32■□□□□ 0.36
C9orf78-201ENST00000372447 CNTNAP2Q9UHC6 1331 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 MACROD2A1Z1Q3 448 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 ZSCAN20P17040 1043 aaPredicted RBP17.31■□□□□ 0.36
C9orf78-201ENST00000372447 AXLP30530 894 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 ABCD1P33897 745 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 FMO5P49326 533 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 KLHL30Q0D2K2 578 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 IKBKEQ14164 716 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 WHAMMP3Q1A5X7 153 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 FBXO38Q6PIJ6 1188 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 C12orf56Q8IXR9 622 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 LINC01599Q8WXQ3 324 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 GOLGA1Q92805 767 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 SPAG5Q96R06 1193 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 ACO2Q99798 780 aaKnown RBP17.31■□□□□ 0.36
C9orf78-201ENST00000372447 ADAM2Q99965 735 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 FTHL17Q9BXU8 183 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 MRPL4Q9BYD3 311 aaKnown RBP17.31■□□□□ 0.36
C9orf78-201ENST00000372447 FHOD1Q9Y613 1164 aa17.31■□□□□ 0.36
C9orf78-201ENST00000372447 ENPP3O14638 875 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 PJA2O43164 708 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 SNRPFP62306 86 aaKnown RBP17.3■□□□□ 0.36
C9orf78-201ENST00000372447 ARID5AQ03989 594 aa17.3■□□□□ 0.36
C9orf78-201ENST00000372447 TRAPPC11Q7Z392 1133 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms