RNA–Protein interactions for RNA: ENST00000372440.6

KCNMA1-208, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-208ENST00000372440 MAN1A1P33908 653 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 BAATQ14032 418 aaPredicted RBP13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 PSMD6Q15008 389 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 RHPN2Q8IUC4 686 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 CCDC110Q8TBZ0 833 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 GRK7Q8WTQ7 553 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 KCNMB3Q9NPA1 279 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 RNF19AQ9NV58 838 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 SUGT1Q9Y2Z0 365 aa13.8□□□□□ -0.2
KCNMA1-208ENST00000372440 SREBF1P36956 1147 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SLC27A3Q5K4L6 730 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 TTC27Q6P3X3 843 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NLGN1Q8N2Q7 840 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 PPP1R36Q96LQ0 422 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 MCEEQ96PE7 176 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 PCDHB18PQ96TA0 734 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 APOL6Q9BWW8 343 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NOP53Q9NZM5 478 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 CCDC78A2IDD5 438 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 KIAA0391O15091 583 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 STAM2O75886 525 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 TMEM191BP0C7N4 346 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NPR1P16066 1061 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 POLE2P56282 527 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 C7orf31Q8N865 590 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SNF8Q96H20 258 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 ZBTB45Q96K62 511 aaPredicted RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NUDCD1Q96RS6 583 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 TARS2Q9BW92 718 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 TRABDQ9H4I3 376 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 DNAJC18Q9H819 358 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 ZC3H4Q9UPT8 1303 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NOP56O00567 594 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 RIPK2O43353 540 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SHOX2O60902 331 aaPredicted RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 CBX6O95503 412 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 TROVE2P10155 538 aaKnown RBP eCLIP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 ITIH3Q06033 890 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SESTD1Q86VW0 696 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 ATXN7L3BQ96GX2 97 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 TMEM121Q9BTD3 319 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 OSBPL8Q9BZF1 889 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SMYD3Q9H7B4 428 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NGRNQ9NPE2 291 aaKnown RBP13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 NYAP2Q9P242 653 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SPEF2Q9C093 1822 aa13.79□□□□□ -0.2
KCNMA1-208ENST00000372440 SLC16A3O15427 465 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 PEX10O60683 326 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 AGTP01019 485 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 NUMBP49757 651 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 ATXN3P54252 364 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 ORC2Q13416 577 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 AEBP2Q6ZN18 517 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 PPM1NQ8N819 430 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 WNT8AQ9H1J5 351 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 WRAP73Q9P2S5 460 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 PODNQ7Z5L7 613 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 LRRC57Q8N9N7 239 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 ETNPPLQ8TBG4 499 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 TTC1Q99614 292 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 OSBPL1AQ9BXW6 950 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 PIH1D1Q9NWS0 290 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 FAM198AQ9UFP1 575 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 UTRNP46939 3433 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 O00370 1275 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 ADRB2P07550 413 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 INHBAP08476 426 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 IL1R1P14778 569 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 PSMA2P25787 234 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 HOXD13P35453 343 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 ALDH5A1P51649 535 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 POLR3FQ9H1D9 316 aaPredicted RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 CHMP2BQ9UQN3 213 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 NEU2Q9Y3R4 380 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 MRPL42Q9Y6G3 142 aaKnown RBP13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 CNTNAP4Q9C0A0 1308 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 BCL9LQ86UU0 1499 aa13.78□□□□□ -0.2
KCNMA1-208ENST00000372440 SMIM24O75264 130 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 MT-ND3P03897 115 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 DRD4P21917 467 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 BRD2P25440 801 aaKnown RBP13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 RASSF2P50749 326 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 DCAF12L1Q5VU92 463 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 CNPY4Q8N129 248 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 EMC1Q8N766 993 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 PICK1Q9NRD5 415 aa13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 R3HDM2Q9Y2K5 976 aaKnown RBP13.77□□□□□ -0.2
KCNMA1-208ENST00000372440 HSPA6P17066 643 aa13.77□□□□□ -0.21
KCNMA1-208ENST00000372440 MAGEA4P43358 317 aa13.77□□□□□ -0.21
KCNMA1-208ENST00000372440 KDSRQ06136 332 aa13.77□□□□□ -0.21
KCNMA1-208ENST00000372440 DRP2Q13474 957 aa13.77□□□□□ -0.21
KCNMA1-208ENST00000372440 MTMR2Q13614 643 aa13.77□□□□□ -0.21
KCNMA1-208ENST00000372440 NID2Q14112 1375 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms