RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 IQGAP2Q13576 1575 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 ATP12AP54707 1039 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 MTHFD1LQ6UB35 978 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 RHOT1Q8IXI2 618 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 TMEM79Q9BSE2 394 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 BFARQ9NZS9 450 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 TRPM2O94759 1503 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 MTTPP55157 894 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 TSC22D1Q15714 1073 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 KCTD21Q4G0X4 260 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 STX12Q86Y82 276 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 ATL2Q8NHH9 583 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 RIN2Q8WYP3 895 aaPredicted RBP16.02■□□□□ 0.16
COL5A1-201ENST00000371817 MYH15Q9Y2K3 1946 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 SMIM31A0A1B0GVY4 71 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 SEMA3DO95025 777 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 PLA2G4BP0C869 781 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 STXBP2Q15833 593 aa16.02■□□□□ 0.16
COL5A1-201ENST00000371817 IZUMO2Q6UXV1 221 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 B3GNT6Q6ZMB0 384 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 TAF8Q7Z7C8 310 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 HNRNPLLQ8WVV9 542 aaKnown RBP16.02■□□□□ 0.15
COL5A1-201ENST00000371817 MAP4K1Q92918 833 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 COPG2Q9UBF2 871 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 FAM58BPP0C7Q3 252 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 TCP10Q12799 353 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 NEK10Q6ZWH5 1172 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 APPL2Q8NEU8 664 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 MYCBPAPQ8TBZ2 947 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 NRBP2Q9NSY0 501 aa16.02■□□□□ 0.15
COL5A1-201ENST00000371817 RESTQ13127 1097 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 KCNQ4P56696 695 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 ANO4Q32M45 955 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 PCNX4Q63HM2 1172 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 ITPRIPL1Q6GPH6 555 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 WNK4Q96J92 1243 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 KIF1BO60333 1816 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 HSMCR30P0CW71 290 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 PDHBP11177 359 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 CALB2P22676 271 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF200P98182 395 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-201ENST00000371817 KDM7AQ6ZMT4 941 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 WDR7Q9Y4E6 1490 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 AKAP5P24588 427 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 CYFIP1Q7L576 1253 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 KRT74Q7RTS7 529 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 HAO1Q9UJM8 370 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 TRMT5Q32P41 509 aaKnown RBP16.01■□□□□ 0.15
COL5A1-201ENST00000371817 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
COL5A1-201ENST00000371817 RAD51BO15315 384 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 TTC39BQ5VTQ0 682 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-201ENST00000371817 UNC45BQ8IWX7 931 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 WDR11Q9BZH6 1224 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 DNAJC12Q9UKB3 198 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 V9GYQ6 96 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 PHF2O75151 1096 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 AP1S2P56377 157 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 MEI1Q5TIA1 1274 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 SUCLG2Q96I99 432 aa16.01■□□□□ 0.15
COL5A1-201ENST00000371817 RBM15Q96T37 977 aaKnown RBP eCLIP16.01■□□□□ 0.15
COL5A1-201ENST00000371817 PRPF4O43172 522 aaKnown RBP eCLIP16■□□□□ 0.15
COL5A1-201ENST00000371817 FKBP6O75344 327 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 TAF5LO75529 589 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 C1orf54Q8WWF1 131 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ZIM3Q96PE6 472 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ECSITQ9BQ95 431 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ATP6V1HQ9UI12 483 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 GGA1Q9UJY5 639 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF23P17027 643 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 OR6P1Q8NGX9 317 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 FLT3P36888 993 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 LRRC47Q8N1G4 583 aaKnown RBP16■□□□□ 0.15
COL5A1-201ENST00000371817 RFFLQ8WZ73 363 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 TRIM51Q9BSJ1 452 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ASPRV1Q53RT3 343 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 IDH3BO43837 385 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ADAMTS2O95450 1211 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 EPS8Q12929 822 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 B3GALT6Q96L58 329 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 FOXP3Q9BZS1 431 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
COL5A1-201ENST00000371817 IL1RL2Q9HB29 575 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 KDM5DQ9BY66 1539 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 A0A1W2PRG6 482 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 RGS2P41220 211 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 ANKMY2Q8IV38 441 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 KLHL3Q9UH77 587 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 KANSL1LA0AUZ9 987 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 PKN2Q16513 984 aaKnown RBP16■□□□□ 0.15
COL5A1-201ENST00000371817 P3H1Q32P28 736 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 SNX30Q5VWJ9 437 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 PKN3Q6P5Z2 889 aa16■□□□□ 0.15
COL5A1-201ENST00000371817 SERBP1Q8NC51 408 aaKnown RBP eCLIP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms