RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 SCFD2Q8WU76 684 aa21.3■■□□□ 1
LHX3-202ENST00000371748 RUBCNQ92622 972 aa21.3■■□□□ 1
LHX3-202ENST00000371748 MS4A4AQ96JQ5 239 aa21.3■■□□□ 1
LHX3-202ENST00000371748 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.3■■□□□ 1
LHX3-202ENST00000371748 SMARCAD1Q9H4L7 1026 aa21.3■■□□□ 1
LHX3-202ENST00000371748 CCL15-CCL14A0A0B4J2E2 113 aa21.29■■□□□ 1
LHX3-202ENST00000371748 DDX3YO15523 660 aaKnown RBP21.29■■□□□ 1
LHX3-202ENST00000371748 HEXIM1O94992 359 aaKnown RBP21.29■■□□□ 1
LHX3-202ENST00000371748 ADORA2AP29274 412 aa21.29■■□□□ 1
LHX3-202ENST00000371748 MXD4Q14582 209 aaPredicted RBP21.29■■□□□ 1
LHX3-202ENST00000371748 CCL15Q16663 113 aa21.29■■□□□ 1
LHX3-202ENST00000371748 CDCA2Q69YH5 1023 aaPredicted RBP21.29■■□□□ 1
LHX3-202ENST00000371748 ZPBP2Q6X784 338 aa21.29■■□□□ 1
LHX3-202ENST00000371748 CGRRF1Q99675 332 aa21.29■■□□□ 1
LHX3-202ENST00000371748 MRPL4Q9BYD3 311 aaKnown RBP21.29■■□□□ 1
LHX3-202ENST00000371748 TMEM110-MUSTN1A8MSY1 372 aa21.29■■□□□ 1
LHX3-202ENST00000371748 CLSTN1O94985 981 aa21.29■■□□□ 1
LHX3-202ENST00000371748 PRKCBP05771 671 aa21.29■■□□□ 1
LHX3-202ENST00000371748 TNNC1P63316 161 aa21.29■■□□□ 1
LHX3-202ENST00000371748 SCARA3Q6AZY7 606 aa21.29■■□□□ 1
LHX3-202ENST00000371748 RASGEF1CQ8N431 466 aa21.29■■□□□ 1
LHX3-202ENST00000371748 APOBEC3GQ9HC16 384 aaKnown RBP21.29■■□□□ 1
LHX3-202ENST00000371748 ESYT3A0FGR9 886 aa21.28■■□□□ 1
LHX3-202ENST00000371748 GAS2O43903 313 aaKnown RBP21.28■■□□□ 1
LHX3-202ENST00000371748 PPFIA4O75335 1185 aa21.28■■□□□ 1
LHX3-202ENST00000371748 HADHBP55084 474 aaKnown RBP21.28■■□□□ 1
LHX3-202ENST00000371748 CCNA1P78396 465 aa21.28■■□□□ 1
LHX3-202ENST00000371748 GUCY2DQ02846 1103 aa21.28■■□□□ 1
LHX3-202ENST00000371748 ZNF792Q3KQV3 632 aa21.28■■□□□ 1
LHX3-202ENST00000371748 DCAF12L1Q5VU92 463 aa21.28■■□□□ 1
LHX3-202ENST00000371748 ZBTB8OSQ8IWT0 167 aa21.28■■□□□ 1
LHX3-202ENST00000371748 NLRP4Q96MN2 994 aa21.28■■□□□ 1
LHX3-202ENST00000371748 RNPEPQ9H4A4 650 aa21.28■■□□□ 1
LHX3-202ENST00000371748 ALG6Q9Y672 507 aa21.28■■□□□ 1
LHX3-202ENST00000371748 RAD51CO43502 376 aa21.28■■□□□ 1
LHX3-202ENST00000371748 GRIN3BO60391 1043 aa21.28■■□□□ 1
LHX3-202ENST00000371748 TOM1L1O75674 476 aa21.28■■□□□ 1
LHX3-202ENST00000371748 CETPP11597 493 aa21.28■■□□□ 1
LHX3-202ENST00000371748 MAGEA9P43362 315 aa21.28■■□□□ 1
LHX3-202ENST00000371748 CLCN3P51790 818 aa21.28■■□□□ 1
LHX3-202ENST00000371748 ARHGAP1Q07960 439 aa21.28■■□□□ 1
LHX3-202ENST00000371748 MAPK6Q16659 721 aa21.28■■□□□ 1
LHX3-202ENST00000371748 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
LHX3-202ENST00000371748 ACO2Q99798 780 aaKnown RBP21.28■■□□□ 1
LHX3-202ENST00000371748 EPB41L5Q9HCM4 733 aa21.28■■□□□ 1
LHX3-202ENST00000371748 DIS3Q9Y2L1 958 aaKnown RBP21.28■■□□□ 1
LHX3-202ENST00000371748 FAM189A1O60320 539 aa21.27■■□□□ 1
LHX3-202ENST00000371748 IGBP1P78318 339 aa21.27■■□□□ 1
LHX3-202ENST00000371748 EFCAB12Q6NXP0 572 aa21.27■■□□□ 1
LHX3-202ENST00000371748 TAPT1Q6NXT6 567 aa21.27■■□□□ 1
LHX3-202ENST00000371748 GTF3C2Q8WUA4 911 aaPredicted RBP21.27■■□□□ 1
LHX3-202ENST00000371748 ZNF653Q96CK0 615 aa21.27■■□□□ 1
LHX3-202ENST00000371748 LOC102724159A0A0B4J2E5 919 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 HBP1O60381 514 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 ITGA4P13612 1032 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 SLC26A2P50443 739 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 CORO7P57737 925 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 MESDQ14696 234 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 PWP2Q15269 919 aaKnown RBP21.26■□□□□ 0.99
LHX3-202ENST00000371748 SND1Q7KZF4 910 aaKnown RBP eCLIP21.26■□□□□ 0.99
LHX3-202ENST00000371748 BRSK2Q8IWQ3 736 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 FAM212AQ96EL1 285 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 FAM81BQ96LP2 452 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 KRIT1O00522 736 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 TCEAL1Q15170 157 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 C11orf63Q6NUN7 778 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 IFT20Q8IY31 132 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 EXOC8Q8IYI6 725 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 BTBD6Q96KE9 485 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 NUP85Q9BW27 656 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 DDX47Q9H0S4 455 aaKnown RBP21.26■□□□□ 0.99
LHX3-202ENST00000371748 GDF3Q9NR23 364 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 UMODL1Q5DID0 1318 aa21.26■□□□□ 0.99
LHX3-202ENST00000371748 SHOX2O60902 331 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 CARSP49589 748 aaKnown RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 GTF2A2P52657 109 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 ZNF211Q13398 564 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 CUL2Q13617 745 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 CDR2LQ86X02 465 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 IFT81Q8WYA0 676 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 ERAP1Q9NZ08 941 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 NUB1Q9Y5A7 615 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 ANKRD65E5RJM6 399 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 INO80B-WBP1J3KQ70 363 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 FGGP02679 453 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 TNFRSF8P28908 595 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 KCTD19Q17RG1 926 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 CLEC16AQ2KHT3 1053 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 ACAD10Q6JQN1 1059 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 ZNF564Q8TBZ8 553 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 ALG3Q92685 438 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 CALR3Q96L12 384 aaKnown RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 JPH2Q9BR39 696 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 INO80BQ9C086 356 aaPredicted RBP21.25■□□□□ 0.99
LHX3-202ENST00000371748 C2orf40Q9H1Z8 148 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 GTF3C4Q9UKN8 822 aa21.25■□□□□ 0.99
LHX3-202ENST00000371748 ABLIM1O14639 778 aa21.24■□□□□ 0.99
LHX3-202ENST00000371748 B4GALT5O43286 388 aa21.24■□□□□ 0.99
LHX3-202ENST00000371748 CYP1A2P05177 515 aa21.24■□□□□ 0.99
LHX3-202ENST00000371748 ACO1P21399 889 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms