RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TRIM58Q8NG06 486 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 FAM212AQ96EL1 285 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 TUBB2BQ9BVA1 445 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 CARD6Q9BX69 1037 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 CFHR5Q9BXR6 569 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 CDHR5Q9HBB8 845 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 CDC23Q9UJX2 597 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 INTUQ9ULD6 942 aa18.88■□□□□ 0.61
SSBP3-203ENST00000371319 TREHO43280 583 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 BUB1O43683 1085 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 B4GALT4O60513 344 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 KPNA6O60684 536 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 FGFR4P22455 802 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 NKX3-2P78367 333 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 CDC42EP1Q00587 391 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 CACNB2Q08289 660 aaPredicted RBP18.87■□□□□ 0.61
SSBP3-203ENST00000371319 TRAPPC11Q7Z392 1133 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 NOP9Q86U38 636 aaKnown RBP18.87■□□□□ 0.61
SSBP3-203ENST00000371319 EFCAB13Q8IY85 973 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 ARID3AQ99856 593 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 MTMR12Q9C0I1 747 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 RPF1Q9H9Y2 349 aaKnown RBP18.87■□□□□ 0.61
SSBP3-203ENST00000371319 RNF186Q9NXI6 227 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 HDAC6Q9UBN7 1215 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 MYH10P35580 1976 aa18.87■□□□□ 0.61
SSBP3-203ENST00000371319 ANO9A1A5B4 782 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 C17orf102A2RUQ5 167 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 ENC1O14682 589 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 SEPT4O43236 478 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 PHACTR2O75167 634 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 IL18RAPO95256 599 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 CLTAP09496 248 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 H2AFZP0C0S5 128 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 C6orf222P0C671 652 aaPredicted RBP18.86■□□□□ 0.61
SSBP3-203ENST00000371319 STAG3L1P0CL83 205 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 CXCL8P10145 99 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 POU5F1Q01860 360 aaKnown RBP18.86■□□□□ 0.61
SSBP3-203ENST00000371319 NCOA4Q13772 614 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 NAA30Q147X3 362 aaPredicted RBP18.86■□□□□ 0.61
SSBP3-203ENST00000371319 H2AFVQ71UI9 128 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 SLC47A2Q86VL8 602 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 PALB2Q86YC2 1186 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 RPUSD2Q8IZ73 545 aaKnown RBP18.86■□□□□ 0.61
SSBP3-203ENST00000371319 EPS8L1Q8TE68 723 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 NOX5Q96PH1 765 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 GCOM2Q9BZD3 368 aaPredicted RBP18.86■□□□□ 0.61
SSBP3-203ENST00000371319 SCN10AQ9Y5Y9 1956 aa18.86■□□□□ 0.61
SSBP3-203ENST00000371319 A0A1B0GUA9 196 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 ERLIN2O94905 339 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 CST3P01034 146 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-203ENST00000371319 ACO1P21399 889 aaKnown RBP18.85■□□□□ 0.61
SSBP3-203ENST00000371319 APLP1P51693 650 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 GALCP54803 685 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 DUOXA2Q1HG44 320 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 DNAJB3Q8WWF6 145 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 ALS2CR12Q96Q35 445 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 PCDHB18PQ96TA0 734 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 MTG1Q9BT17 334 aaPredicted RBP18.85■□□□□ 0.61
SSBP3-203ENST00000371319 ACP6Q9NPH0 428 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 TAS2R14Q9NYV8 317 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 NUB1Q9Y5A7 615 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 UMODL1Q5DID0 1318 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 LACTBL1A8MY62 500 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 TADA3O75528 432 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 PGK1P00558 417 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 DARSP14868 501 aaKnown RBP18.85■□□□□ 0.61
SSBP3-203ENST00000371319 CYP11B1P15538 503 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 NOP14P78316 857 aaKnown RBP18.85■□□□□ 0.61
SSBP3-203ENST00000371319 CUL2Q13617 745 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 GNASQ5JWF2 1037 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 DDX1Q92499 740 aaKnown RBP18.85■□□□□ 0.61
SSBP3-203ENST00000371319 OSMRQ99650 979 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 JRKLQ9Y4A0 524 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 PCDHGC5Q9Y5F6 944 aa18.85■□□□□ 0.61
SSBP3-203ENST00000371319 NCANO14594 1321 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 A0A0A6YYK5 440 aaPredicted RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 ASS1P00966 412 aaKnown RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 TFRCP02786 760 aaKnown RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 TMEM253P0C7T8 217 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 HOXA11P31270 313 aaPredicted RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 TFAMQ00059 246 aaKnown RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 FMO1Q01740 532 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 NCBP1Q09161 790 aaKnown RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 KYAT1Q16773 422 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 TAF3Q5VWG9 929 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 UBR7Q8N806 425 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 C7orf31Q8N865 590 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 MNS1Q8NEH6 495 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 SEPT11Q9NVA2 429 aaKnown RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 V9GYY5 206 aaPredicted RBP18.84■□□□□ 0.61
SSBP3-203ENST00000371319 RALGAPA2Q2PPJ7 1873 aa18.84■□□□□ 0.61
SSBP3-203ENST00000371319 TMCO5BA8MYB1 307 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 ADAMTS4O75173 837 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 PALMO75781 387 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 TNNC2P02585 160 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 MMEP08473 750 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 NFICP08651 508 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 TMEM191BP0C7N4 346 aa18.83■□□□□ 0.6
SSBP3-203ENST00000371319 RARBP10826 455 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms