RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ASAP3Q8TDY4 903 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 VSNL1P62760 191 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 MKRN4PQ13434 485 aaPredicted RBP23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 STAT4Q14765 748 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 DCUN1D1Q96GG9 259 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 OSBPL1AQ9BXW6 950 aa23.33■■□□□ 1.33
TM9SF3-201ENST00000371142 SEC24DO94855 1032 aaPredicted RBP23.33■■□□□ 1.32
TM9SF3-201ENST00000371142 APRTP07741 180 aa23.33■■□□□ 1.32
TM9SF3-201ENST00000371142 PCDHGB4Q9UN71 923 aa23.33■■□□□ 1.32
TM9SF3-201ENST00000371142 NRKQ7Z2Y5 1582 aa23.33■■□□□ 1.32
TM9SF3-201ENST00000371142 OCM2P0CE71 109 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 OCMP0CE72 109 aaPredicted RBP23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 FDX1P10109 184 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 PHF20Q9BVI0 1012 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 IRX2Q9BZI1 471 aaPredicted RBP23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 SLC7A5P2Q9GIP4 190 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 TLR2O60603 784 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 PDGFRBP09619 1106 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 RARBP10826 455 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 SH3TC2Q8TF17 1288 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 TMEM62Q0P6H9 643 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 BAATQ14032 418 aaPredicted RBP23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 CCDC85BQ15834 202 aaPredicted RBP23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 LONRF1Q17RB8 773 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 SENP7Q9BQF6 1050 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 MTMR4Q9NYA4 1195 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 HECW2Q9P2P5 1572 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 SNX12Q9UMY4 172 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 RBM46Q8TBY0 533 aaKnown RBP23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 COG1Q8WTW3 980 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 OVOS2A0A0G2JMS6 1433 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 OVOS2A0A0J9YW53 1432 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 OVOS2Q6IE36 1432 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 MAPRE2Q15555 327 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 RRM2BQ7LG56 351 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 OR9Q1Q8NGQ5 310 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 FLT1P17948 1338 aa23.32■■□□□ 1.32
TM9SF3-201ENST00000371142 ASMTLO95671 621 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 PDGFRAP16234 1089 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 STK33Q9BYT3 514 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 MEFVO15553 781 aaPredicted RBP23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 PDAP1Q13442 181 aaKnown RBP23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 ELMO2Q96JJ3 720 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 TARSL2A2RTX5 802 aaKnown RBP23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 ZNF197O14709 1029 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 SERPIND1P05546 499 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 EXOSC10Q01780 885 aaKnown RBP23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 WWP1Q9H0M0 922 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 DAGLAQ9Y4D2 1042 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 LAMC1P11047 1609 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 TNPO2O14787 897 aaKnown RBP23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 TMEM132DQ14C87 1099 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 KDM4CQ9H3R0 1056 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 XPO7Q9UIA9 1087 aaKnown RBP23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 E2F8A0AVK6 867 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 HMOX2P30519 316 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 BLVRAP53004 296 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 GALCP54803 685 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 ZNF543Q08ER8 600 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 NCOA4Q13772 614 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 KCNV1Q6PIU1 500 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 FAM118BQ9BPY3 351 aa23.31■■□□□ 1.32
TM9SF3-201ENST00000371142 C3orf70A6NLC5 250 aaPredicted RBP23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 PHF2O75151 1096 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 IL10P22301 178 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 FMO5P49326 533 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 NBPF10Q6P3W6 841 aaKnown RBP23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 SPATA21Q7Z572 469 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 MFN1Q8IWA4 741 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 TRIM10Q9UDY6 481 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 NBPF26B4DH59 902 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 GRAP2O75791 330 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 PGM1P36871 562 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 DPYDQ12882 1025 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 SLC18A3Q16572 532 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 NBPF15Q8N660 670 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 TBC1D16Q8TBP0 767 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 SPDYAQ5MJ70 313 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 YAF2Q8IY57 180 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 AGPAT5Q9NUQ2 364 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 RBP5P82980 135 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 HIC1Q14526 733 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 MICALL2Q8IY33 904 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 GRAMD1AQ96CP6 724 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 DBR1Q9UK59 544 aaKnown RBP23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 SNRNP35Q16560 246 aaKnown RBP23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 RARS2Q5T160 578 aaKnown RBP23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 RAB6BQ9NRW1 208 aa23.3■■□□□ 1.32
TM9SF3-201ENST00000371142 COG2Q14746 738 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 KIZQ2M2Z5 673 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 MTHFD1LQ6UB35 978 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 NPHS2Q9NP85 383 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 ANGPT2O15123 496 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 DGAT1O75907 488 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 SYTL3Q4VX76 610 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 PLA2G4FQ68DD2 849 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 NUP93Q8N1F7 819 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 ATPAF2Q8N5M1 289 aa23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 RBBP8NLQ8NC74 664 aaPredicted RBP23.29■■□□□ 1.32
TM9SF3-201ENST00000371142 DDX50Q9BQ39 737 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms