RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 ABL1P00519 1130 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 MYBPC2Q14324 1141 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 XXYLT1Q8NBI6 393 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 TTC13Q8NBP0 860 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 TNIP2Q8NFZ5 429 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CSRNP1Q96S65 589 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 GID8Q9NWU2 228 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CCPG1Q9ULG6 757 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 PEX3P56589 373 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 SNAP25P60880 206 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 EFTUD2Q15029 972 aaKnown RBP eCLIP13.38□□□□□ -0.27
GPC4-201ENST00000370828 HABP4Q5JVS0 413 aaKnown RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 GJB7Q6PEY0 223 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 FAM149B1Q96BN6 582 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 ADNPQ9H2P0 1102 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 NGRNQ9NPE2 291 aaKnown RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 USP17L5A8MUK1 530 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 RTN2O75298 545 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CBX6O95503 412 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 RARGP13631 454 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 GSTT1P30711 240 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 VAMP7P51809 220 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 TUBA4AP68366 448 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 TFAMQ00059 246 aaKnown RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 FOXD4Q12950 439 aaPredicted RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 KRT72Q14CN4 511 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 ISLR2Q6UXK2 745 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 SCUBE1Q8IWY4 988 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 RYBPQ8N488 228 aaPredicted RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 CALML6Q8TD86 181 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 EXT2Q93063 718 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 RWDD3Q9Y3V2 267 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 UTYO14607 1347 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 PNMA6FA0A0J9YX94 578 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 DEAF1O75398 565 aaPredicted RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 LCA5LO95447 670 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 USP6P35125 1406 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 RPS6P62753 249 aaKnown RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 BTNL9Q6UXG8 535 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 SYDE1Q6ZW31 735 aaPredicted RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 SLC25A41Q8N5S1 370 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 KIFC3Q9BVG8 833 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 STK33Q9BYT3 514 aa13.38□□□□□ -0.27
GPC4-201ENST00000370828 CORO1CQ9ULV4 474 aaPredicted RBP13.38□□□□□ -0.27
GPC4-201ENST00000370828 LGR5O75473 907 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 OATP04181 439 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 TYK2P29597 1187 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 SLC34A1Q06495 639 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 MEI1Q5TIA1 1274 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 PPP1R2P3Q6NXS1 205 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 TMC5Q6UXY8 1006 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 RAB44Q7Z6P3 723 aaPredicted RBP13.37□□□□□ -0.27
GPC4-201ENST00000370828 ALKBH8Q96BT7 664 aaKnown RBP13.37□□□□□ -0.27
GPC4-201ENST00000370828 ITM2BQ9Y287 266 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 H0YCG3 227 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 RNPEPL1Q9HAU8 725 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 MRPL40Q9NQ50 206 aaKnown RBP13.37□□□□□ -0.27
GPC4-201ENST00000370828 EMC3Q9P0I2 261 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 AKAP10O43572 662 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 KRT39Q6A163 491 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 TTI2Q6NXR4 508 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 C3orf62Q6ZUJ4 267 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 ATXN7L3BQ96GX2 97 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 GDF3Q9NR23 364 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 DGKIO75912 1065 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 GYS1P13807 737 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 LRRC74BQ6ZQY2 392 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 TMEM110Q86TL2 294 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
GPC4-201ENST00000370828 BTBD7Q9P203 1132 aa13.37□□□□□ -0.27
GPC4-201ENST00000370828 ZNF804BA4D1E1 1349 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 CDK8P49336 464 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 PTK7Q13308 1070 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 TSHZ1Q6ZSZ6 1077 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 MCF2L2Q86YR7 1114 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 ST13P5Q8NFI4 369 aaPredicted RBP13.36□□□□□ -0.27
GPC4-201ENST00000370828 CYGBQ8WWM9 190 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 RBM17Q96I25 401 aaKnown RBP13.36□□□□□ -0.27
GPC4-201ENST00000370828 KLHL25Q9H0H3 589 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 DHX36Q9H2U1 1008 aaKnown RBP13.36□□□□□ -0.27
GPC4-201ENST00000370828 PCMTD2Q9NV79 361 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 PEX14O75381 377 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 APOA1P02647 267 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 ADARP55265 1226 aaKnown RBP13.36□□□□□ -0.27
GPC4-201ENST00000370828 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 CEP170P1Q96L14 293 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 PKD2L2Q9NZM6 624 aa13.36□□□□□ -0.27
GPC4-201ENST00000370828 NMT1P30419 496 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms