RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TRIM4Q9C037 500 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 CCDC90BQ9GZT6 254 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 DIS3Q9Y2L1 958 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 SPATA31E1Q6ZUB1 1445 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF500O60304 480 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 NR3C2P08235 984 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 MYBL1P10243 752 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 GOLGA7BQ2TAP0 167 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ATG9AQ7Z3C6 839 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 DEFB128Q7Z7B8 93 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 TBC1D1Q86TI0 1168 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 TMCO5AQ8N6Q1 288 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 SEPT1Q8WYJ6 367 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 AGPAT1Q99943 283 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 C17orf102A2RUQ5 167 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 MEFVO15553 781 aaPredicted RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 SCP2P22307 547 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 TYK2P29597 1187 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ERFP50548 548 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 SMTNL2Q2TAL5 461 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ANKS3Q6ZW76 656 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 C11orf74Q86VG3 221 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 DHX40Q8IX18 779 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ATG4CQ96DT6 458 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 TARBP1Q13395 1621 aaKnown RBP9.02□□□□□ -0.97
ABCA4-201ENST00000370225 ADCY10Q96PN6 1610 aa9.02□□□□□ -0.97
ABCA4-201ENST00000370225 PVALEFA0A1B0GWK0 134 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SYCE1LA8MT33 242 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 EEF2KO00418 725 aaKnown RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TADA3O75528 432 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CAMTA2O94983 1202 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ARIH2O95376 493 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TCF7P36402 384 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 KRT17Q04695 432 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 LRRC74AQ0VAA2 488 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ITPK1Q13572 414 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 KLHL38Q2WGJ6 581 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 DCAF6Q58WW2 860 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 XKR3Q5GH77 459 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 PKN3Q6P5Z2 889 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 BTBD6Q96KE9 485 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ADGRA2Q96PE1 1338 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 GYG2O15488 501 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 IZUMO3Q5VZ72 239 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SNX31Q8N9S9 440 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 LPAR1Q92633 364 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 C18orf8Q96DM3 657 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SNF8Q96H20 258 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CENPKQ9BS16 269 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 BFARQ9NZS9 450 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ZFP69BQ9UJL9 534 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ORC4O43929 436 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 MAGOHP61326 146 aaKnown RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CYP4A22Q5TCH4 519 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 OSBPL9Q96SU4 736 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 MIF4GDA9UHW6 222 aaKnown RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SLC9A5Q14940 896 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SNRNP35Q16560 246 aaKnown RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 MMS22LQ6ZRQ5 1243 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TEX12Q9BXU0 123 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 NAGPAQ9UK23 515 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ATP11BQ9Y2G3 1177 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 A0A087WUV0 522 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 APRTP07741 180 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 FDX1P10109 184 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 PDGFRAP16234 1089 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 KLRK1P26718 216 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 WEE1P30291 646 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 EIF3BP55884 814 aaKnown RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SNX17Q15036 470 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TAF11Q15544 211 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ALS2CLQ60I27 953 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CATSPER3Q86XQ3 398 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 NUDCD3Q8IVD9 361 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ASAP3Q8TDY4 903 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 MS4A14Q96JA4 679 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 APOL5Q9BWW9 433 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TRIM45Q9H8W5 580 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 MAD2L2Q9UI95 211 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ANGPTL2Q9UKU9 493 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 A2ML1A8K2U0 1454 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 ATMINO43313 823 aaPredicted RBP9.01□□□□□ -0.97
ABCA4-201ENST00000370225 DNAJB2P25686 324 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CLCN6P51797 869 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 FSCBQ5H9T9 825 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 SHC4Q6S5L8 630 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CCDC33Q8N5R6 958 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 CPB2Q96IY4 423 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TAAR1Q96RJ0 339 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 TRIM62Q9BVG3 475 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 PCDHB8Q9UN66 801 aa9.01□□□□□ -0.97
ABCA4-201ENST00000370225 PFASO15067 1338 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 SGO1Q5FBB7 561 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 LRRC8EQ6NSJ5 796 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 RRM2BQ7LG56 351 aa9□□□□□ -0.97
ABCA4-201ENST00000370225 B4GALNT2Q8NHY0 566 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms