RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 BASP1P80723 227 aaKnown RBP11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 PPATQ06203 517 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 TMEM132AQ24JP5 1023 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 ZCWPW2Q504Y3 356 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 FAM102BQ5T8I3 360 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 BSPRYQ5W0U4 402 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 RGS9BPQ6ZS82 235 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 PYROXD1Q8WU10 500 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 MTMR4Q9NYA4 1195 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 NEU2Q9Y3R4 380 aa11.06□□□□□ -0.64
PRPF38B-201ENST00000370021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 F5H423 210 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 TAC1P20366 129 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ADRA1DP25100 572 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ALDH18A1P54886 795 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 TRAF1Q13077 416 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ITPK1Q13572 414 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 SPATA24Q86W54 205 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 LRRC6Q86X45 466 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 CCDC89Q8N998 374 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 C1orf131Q8NDD1 294 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 RAB3IL1Q8TBN0 382 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 SLC26A7Q8TE54 656 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 GRK7Q8WTQ7 553 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ARHGEF3Q9NR81 526 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 SERPINB13Q9UIV8 391 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 CTDP1Q9Y5B0 961 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 M0R2N6 131 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 CREB3O43889 395 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 MT-ND3P03897 115 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 VCAM1P19320 739 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 SERPINB3P29508 390 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 TEX9Q8N6V9 391 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 CHKBQ9Y259 395 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 DIS3Q9Y2L1 958 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 ATP6V1B1P15313 513 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 RRM1P23921 792 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 VAMP7P51809 220 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 PEX3P56589 373 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 MTFR1Q15390 333 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 TMEM119Q4V9L6 283 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 IZUMO2Q6UXV1 221 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 RASGEF1CQ8N431 466 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 CBWD1Q9BRT8 395 aa11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 CNOT7Q9UIV1 285 aaKnown RBP11.05□□□□□ -0.64
PRPF38B-201ENST00000370021 SLC16A4O15374 487 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 USP1O94782 785 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TPBGLP0DKB5 382 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 ITIH2P19823 946 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 SP100P23497 879 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 ATP13A4Q4VNC1 1196 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 RBBP8NLQ8NC74 664 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 MIPOL1Q8TD10 442 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 DCLRE1BQ9H816 532 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 PICK1Q9NRD5 415 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 R3HDM2Q9Y2K5 976 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 LOC100653049A0A140TA62 436 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 E2F8A0AVK6 867 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 ATP5HO75947 161 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 KRT34O76011 436 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 CETPP11597 493 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 ATP6V1C1P21283 382 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 SSTR1P30872 391 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 CLUL1Q15846 466 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 PCNX4Q63HM2 1172 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 RASSF3Q86WH2 238 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 ATL2Q8NHH9 583 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 AGR3Q8TD06 166 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 KIFC3Q9BVG8 833 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TRAIPQ9BWF2 469 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 EPB41L4BQ9H329 900 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TMEM165Q9HC07 324 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 SAE1Q9UBE0 346 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 WASF2Q9Y6W5 498 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TOGARAM1Q9Y4F4 1720 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TMEM150BA6NC51 233 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 I3L4J1 428 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 EML1O00423 815 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 SCNN1BP51168 640 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TMPRSS15P98073 1019 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 EMC10Q5UCC4 262 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 RINT1Q6NUQ1 792 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 GSDMBQ8TAX9 411 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TCHPQ9BT92 498 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms