RNA–Protein interactions for RNA: ENST00000369484.7

CMC4-202, Transcript of C-X9-C motif containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMC4, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4-202ENST00000369484 RSPO2Q6UXX9 243 aaPredicted RBP29.24■■■□□ 2.27
CMC4-202ENST00000369484 SHDQ96IW2 340 aa29.24■■■□□ 2.27
CMC4-202ENST00000369484 FOXQ1Q9C009 403 aa29.24■■■□□ 2.27
CMC4-202ENST00000369484 BACE2Q9Y5Z0 518 aa29.24■■■□□ 2.27
CMC4-202ENST00000369484 CDY1Q9Y6F8 540 aa29.24■■■□□ 2.27
CMC4-202ENST00000369484 R4GN57 208 aa29.24■■■□□ 2.27
CMC4-202ENST00000369484 LMNAP02545 664 aaKnown RBP29.23■■■□□ 2.27
CMC4-202ENST00000369484 GLULP15104 373 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 TRAPPC10P48553 1259 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 CCDC83Q8IWF9 413 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 C4orf32Q8N8J7 132 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 C3orf58Q8NDZ4 430 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 FBXO18Q8NFZ0 1043 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 DDX27Q96GQ7 796 aaKnown RBP29.23■■■□□ 2.27
CMC4-202ENST00000369484 LLPHQ9BRT6 129 aaKnown RBP29.23■■■□□ 2.27
CMC4-202ENST00000369484 KCNH3Q9ULD8 1083 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 LIMCH1Q9UPQ0 1083 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 TNFSF13BQ9Y275 285 aa29.23■■■□□ 2.27
CMC4-202ENST00000369484 EIF5BO60841 1220 aaKnown RBP29.22■■■□□ 2.27
CMC4-202ENST00000369484 NEFLP07196 543 aa29.22■■■□□ 2.27
CMC4-202ENST00000369484 TKTP29401 623 aaKnown RBP29.22■■■□□ 2.27
CMC4-202ENST00000369484 APBB1IPQ7Z5R6 666 aaPredicted RBP29.22■■■□□ 2.27
CMC4-202ENST00000369484 C1orf210Q8IVY1 113 aa29.22■■■□□ 2.27
CMC4-202ENST00000369484 NPAS3Q8IXF0 933 aa29.22■■■□□ 2.27
CMC4-202ENST00000369484 DDX23Q9BUQ8 820 aaKnown RBP29.22■■■□□ 2.27
CMC4-202ENST00000369484 GOLGA2P5Q9HBQ8 144 aa29.22■■■□□ 2.27
CMC4-202ENST00000369484 HCFC1R1Q9NWW0 138 aa29.22■■■□□ 2.27
CMC4-202ENST00000369484 DNMT3BQ9UBC3 853 aaKnown RBP29.22■■■□□ 2.27
CMC4-202ENST00000369484 K7ERI5 159 aa29.21■■■□□ 2.27
CMC4-202ENST00000369484 PABPC1LQ4VXU2 614 aaKnown RBP29.21■■■□□ 2.27
CMC4-202ENST00000369484 ANKS3Q6ZW76 656 aa29.21■■■□□ 2.27
CMC4-202ENST00000369484 CEP120Q8N960 986 aa29.21■■■□□ 2.27
CMC4-202ENST00000369484 LRWD1Q9UFC0 647 aa29.21■■■□□ 2.27
CMC4-202ENST00000369484 KIAA1024Q9UPX6 916 aa29.21■■■□□ 2.27
CMC4-202ENST00000369484 PHLPP2Q6ZVD8 1323 aa29.2■■■□□ 2.27
CMC4-202ENST00000369484 SMIM28A0A1B0GU29 152 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 TRAPPC3O43617 180 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 SP9P0CG40 484 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 GRM5P41594 1212 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 ID4P47928 161 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 SOX4Q06945 474 aaPredicted RBP29.2■■■□□ 2.26
CMC4-202ENST00000369484 SNW1Q13573 536 aaKnown RBP29.2■■■□□ 2.26
CMC4-202ENST00000369484 XKR4Q5GH76 650 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 KCNG4Q8TDN1 519 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 CDT1Q9H211 546 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 PTPRHQ9HD43 1115 aa29.2■■■□□ 2.26
CMC4-202ENST00000369484 DDX19AQ9NUU7 478 aaKnown RBP29.2■■■□□ 2.26
CMC4-202ENST00000369484 KANSL1LA0AUZ9 987 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 I3L4J1 428 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 LRRN2O75325 713 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 BRCC3P46736 316 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 PRKCQQ04759 706 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 PDIA5Q14554 519 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 NBR1Q14596 966 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 MLF2Q15773 248 aaPredicted RBP29.19■■■□□ 2.26
CMC4-202ENST00000369484 ZC3H14Q6PJT7 736 aaKnown RBP29.19■■■□□ 2.26
CMC4-202ENST00000369484 ALKAL1Q6UXT8 129 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 ERMP1Q7Z2K6 904 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 IGSF22Q8N9C0 903 aa29.19■■■□□ 2.26
CMC4-202ENST00000369484 ACO2Q99798 780 aaKnown RBP29.19■■■□□ 2.26
CMC4-202ENST00000369484 TOPORSQ9NS56 1045 aaPredicted RBP29.19■■■□□ 2.26
CMC4-202ENST00000369484 NOL7Q9UMY1 257 aaKnown RBP29.19■■■□□ 2.26
CMC4-202ENST00000369484 NPTX2P47972 431 aa29.18■■■□□ 2.26
CMC4-202ENST00000369484 HMGN5P82970 282 aaKnown RBP29.18■■■□□ 2.26
CMC4-202ENST00000369484 SLC8B1Q6J4K2 584 aa29.18■■■□□ 2.26
CMC4-202ENST00000369484 DAW1Q8N136 415 aa29.18■■■□□ 2.26
CMC4-202ENST00000369484 SNX29Q8TEQ0 813 aa29.18■■■□□ 2.26
CMC4-202ENST00000369484 KXD1Q9BQD3 176 aa29.18■■■□□ 2.26
CMC4-202ENST00000369484 CCDC94Q9BW85 323 aaPredicted RBP29.18■■■□□ 2.26
CMC4-202ENST00000369484 STK24Q9Y6E0 443 aa29.18■■■□□ 2.26
CMC4-202ENST00000369484 SEC24BO95487 1268 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 YARSP54577 528 aaKnown RBP29.17■■■□□ 2.26
CMC4-202ENST00000369484 PEX3P56589 373 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 PFKPQ01813 784 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 ROR1Q01973 937 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 GNL2Q13823 731 aaKnown RBP29.17■■■□□ 2.26
CMC4-202ENST00000369484 ZNF568Q3ZCX4 644 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 SLC44A4Q53GD3 710 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 TAS1R3Q7RTX0 852 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 MAML2Q8IZL2 1156 aaPredicted RBP29.17■■■□□ 2.26
CMC4-202ENST00000369484 TMEM134Q9H6X4 195 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 AVENQ9NQS1 362 aaPredicted RBP29.17■■■□□ 2.26
CMC4-202ENST00000369484 PPP4R2Q9NY27 417 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 ARHGAP28Q9P2N2 729 aa29.17■■■□□ 2.26
CMC4-202ENST00000369484 MRPS23Q9Y3D9 190 aaKnown RBP29.17■■■□□ 2.26
CMC4-202ENST00000369484 CCDC169A6NNP5 214 aa29.16■■■□□ 2.26
CMC4-202ENST00000369484 ZNF461Q8TAF7 563 aa29.16■■■□□ 2.26
CMC4-202ENST00000369484 ING5Q8WYH8 240 aa29.16■■■□□ 2.26
CMC4-202ENST00000369484 ZMAT2Q96NC0 199 aaKnown RBP29.16■■■□□ 2.26
CMC4-202ENST00000369484 MRPL4Q9BYD3 311 aaKnown RBP29.16■■■□□ 2.26
CMC4-202ENST00000369484 OSBPL6Q9BZF3 934 aa29.16■■■□□ 2.26
CMC4-202ENST00000369484 SLC38A7Q9NVC3 462 aa29.16■■■□□ 2.26
CMC4-202ENST00000369484 ARHGEF37A1IGU5 675 aa29.15■■■□□ 2.26
CMC4-202ENST00000369484 RHOP08100 348 aa29.15■■■□□ 2.26
CMC4-202ENST00000369484 OSTNP61366 133 aa29.15■■■□□ 2.26
CMC4-202ENST00000369484 PTGDRQ13258 359 aa29.15■■■□□ 2.26
CMC4-202ENST00000369484 DMP1Q13316 513 aaPredicted RBP29.15■■■□□ 2.26
CMC4-202ENST00000369484 SLC5A9Q2M3M2 681 aa29.15■■■□□ 2.26
CMC4-202ENST00000369484 VARS2Q5ST30 1063 aaKnown RBP29.15■■■□□ 2.26
CMC4-202ENST00000369484 RAB34Q9BZG1 259 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms