RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 GGT7Q9UJ14 662 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 CFL1P23528 166 aaKnown RBP3.96□□□□□ -1.78
SYNE1-207ENST00000367255 SSTR3P32745 418 aaPredicted RBP3.96□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC17Q96LX7 622 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.96□□□□□ -1.78
SYNE1-207ENST00000367255 VPS11Q9H270 941 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 TRPV5Q9NQA5 729 aa3.96□□□□□ -1.78
SYNE1-207ENST00000367255 C2orf74A8MZ97 194 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PPP2R2AP63151 447 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ABRQ12979 859 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ACVR2BQ13705 512 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 FBXW10Q5XX13 1052 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CASP10Q92851 521 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TESK2Q96S53 571 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PRPF18Q99633 342 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TAF1DQ9H5J8 278 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ANKFY1Q9P2R3 1169 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 NPR3P17342 541 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TIMM10P62072 90 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 SLC39A6Q13433 755 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 RRAGBQ5VZM2 374 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TSPEARQ8WU66 669 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TSPAN17Q96FV3 270 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CHL1O00533 1208 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PSMA2P25787 234 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 HTR7P34969 479 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TNNI2P48788 182 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 INTS6LQ5JSJ4 861 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 LHFPL3Q86UP9 236 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 KCNB2Q92953 911 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 STK39Q9UEW8 545 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 LINC00854A0A1B0GVQ3 168 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 SNPHO15079 494 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 R3HDM1Q15032 1099 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 METTL2BQ6P1Q9 378 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ARHGAP22Q7Z5H3 698 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 RDH13Q8NBN7 331 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ACTRT1Q8TDG2 376 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PABPC3Q9H361 631 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 COPZ2Q9P299 210 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 FRMPD2Q68DX3 1309 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 GRM8O00222 908 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 MYO1DO94832 1006 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 GRIK1P39086 918 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 STAT5AP42229 794 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 STAT5BP51692 787 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ACAP1Q15027 740 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PLCL1Q15111 1095 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 NFRKBQ6P4R8 1299 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PEX26Q7Z412 305 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 LRRC47Q8N1G4 583 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 NOL11Q9H8H0 719 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 AGTPBP1Q9UPW5 1226 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 SHOC2Q9UQ13 582 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 USP15Q9Y4E8 981 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 GRXCR2A6NFK2 248 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 MAP2K7O14733 419 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 MKRN4PQ13434 485 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 C3orf67Q6ZVT6 689 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CHPFQ8IZ52 775 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 SPIRE2Q8WWL2 714 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 UNKLQ9H9P5 680 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 MYO3BQ8WXR4 1341 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 FAM47DPA6NHR8 397 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 UNC45BQ8IWX7 931 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 NPLOC4Q8TAT6 608 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 OMA1Q96E52 524 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CENPOQ9BU64 300 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 FANCLQ9NW38 375 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 RTCBQ9Y3I0 505 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CPDO75976 1380 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 METTL21EPA6NDL7 271 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CTNND1O60716 968 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 RALGDSQ12967 914 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 C16orf87Q6PH81 154 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 METTL3Q86U44 580 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 GALNT15Q8N3T1 639 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 SRBD1Q8N5C6 995 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 BLZF1Q9H2G9 400 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 NFE2L3Q9Y4A8 694 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CAPN7Q9Y6W3 813 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PSMD3O43242 534 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 FGAP02671 866 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CABP4P57796 275 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 IFIT5Q13325 482 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 MSLNQ13421 630 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PREPLQ4J6C6 727 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TRAF7Q6Q0C0 670 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CIDECQ96AQ7 238 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 ZIM3Q96PE6 472 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 COPRSQ9NQ92 184 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 AMFRQ9UKV5 643 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 EPN1Q9Y6I3 576 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 EYA4O95677 639 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 SERPINH1P50454 418 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 TOP3AQ13472 1001 aaPredicted RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 PAPD7Q5XG87 772 aaKnown RBP3.95□□□□□ -1.78
SYNE1-207ENST00000367255 Q6ZUG5 572 aa3.95□□□□□ -1.78
SYNE1-207ENST00000367255 CCT6BQ92526 530 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms