RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PDIA6Q15084 440 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 ZNF667Q5HYK9 610 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 SPATA21Q7Z572 469 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 EXO5Q9H790 373 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 RAB20Q9NX57 234 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 SPATA31A5Q5VU36 1347 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 SPATA31A7Q8IWB4 1347 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 IFT172Q9UG01 1749 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 ZNF536O15090 1300 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 FRMPD2Q68DX3 1309 aaPredicted RBP9.11□□□□□ -0.95
SYNE1-206ENST00000367253 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
SYNE1-206ENST00000367253 B4E1Z4 1266 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 GUCA1AP43080 201 aaPredicted RBP9.11□□□□□ -0.95
SYNE1-206ENST00000367253 TSC22D1Q15714 1073 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 TSHZ3Q63HK5 1081 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 SLC44A5Q8NCS7 719 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 CDKL2Q92772 493 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 SLC32A1Q9H598 525 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 COG4Q9H9E3 785 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 FGFR1OP2Q9NVK5 253 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 LAD1O00515 517 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 CYP2C19P33261 490 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 NEK8Q86SG6 692 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 KSR1Q8IVT5 923 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 DDI1Q8WTU0 396 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 HAUS4Q9H6D7 363 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 CNOT10Q9H9A5 744 aaKnown RBP9.11□□□□□ -0.95
SYNE1-206ENST00000367253 MRPL39Q9NYK5 338 aaKnown RBP9.11□□□□□ -0.95
SYNE1-206ENST00000367253 KCNH3Q9ULD8 1083 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 ATP8A1Q9Y2Q0 1164 aa9.11□□□□□ -0.95
SYNE1-206ENST00000367253 USP32Q8NFA0 1604 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 GRXCR2A6NFK2 248 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 SNTNA6NMZ2 147 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TTC38Q5R3I4 469 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 THEMIS2Q5TEJ8 643 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 CHMP1BQ7LBR1 199 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 CABP7Q86V35 215 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 OLFM1Q99784 485 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 C8orf4Q9NR00 106 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TBC1D23Q9NUY8 699 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 STOML1Q9UBI4 398 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 WARS2Q9UGM6 360 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 PLSCR1O15162 318 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 EFNA5P52803 228 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 RHBDL3P58872 404 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 DHX9Q08211 1270 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 AP3B2Q13367 1082 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 GPR158Q5T848 1215 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 SFMBT2Q5VUG0 894 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 RSAD2Q8WXG1 361 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 NT5C1BQ96P26 610 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 RAVER2Q9HCJ3 691 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TAF4O00268 1085 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 DDNO94850 711 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 MLYCDO95822 493 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 KRT6AP02538 564 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 KRT6BP04259 564 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 DLATP10515 647 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 CHRM1P11229 460 aaPredicted RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 ITGAXP20702 1163 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 ABCB4P21439 1286 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 EEF1GP26641 437 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 KRT6CP48668 564 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 RAB27AP51159 221 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 STX1BP61266 288 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 SYCP2LQ5T4T6 812 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TOGARAM2Q6ZUX3 1019 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 SAPCD2Q86UD0 394 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 C7orf25Q9BPX7 421 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 CNPPD1Q9BV87 410 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TRIM8Q9BZR9 551 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 ELOVL2Q9NXB9 296 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 FAM170AA1A519 330 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 MCAMP43121 646 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 EIF2B2P49770 351 aaKnown RBP9.1□□□□□ -0.95
SYNE1-206ENST00000367253 DCAF4L1Q3SXM0 396 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 CEP55Q53EZ4 464 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 ARHGEF18Q6ZSZ5 1173 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 SERPINI1Q99574 410 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 SPON2Q9BUD6 331 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 TAB2Q9NYJ8 693 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
SYNE1-206ENST00000367253 KDRP35968 1356 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 SPAG7O75391 227 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 CD4P01730 458 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 CLUP10909 449 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 HNRNPH1P31943 449 aaKnown RBP9.09□□□□□ -0.95
SYNE1-206ENST00000367253 LSP1P33241 339 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 ADCY8P40145 1251 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 CAPZA2P47755 286 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 IRF5Q13568 498 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 TMEM132DQ14C87 1099 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 GPBP1Q86WP2 473 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 ZNF248Q8NDW4 579 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 OR8K1Q8NGG5 319 aa9.09□□□□□ -0.95
SYNE1-206ENST00000367253 IFT43Q96FT9 208 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms