RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LRRC1Q9BTT6 524 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 DAGLAQ9Y4D2 1042 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 SFI1A8K8P3 1242 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 VPS72Q15906 364 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 ASAP3Q8TDY4 903 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 SLC38A7Q9NVC3 462 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 CDY2AQ9Y6F7 541 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 CDY1Q9Y6F8 540 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 RPSAP08865 295 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 CDO1Q16878 200 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 RWDD4Q6NW29 188 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 ASPSCR1Q9BZE9 553 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 KCND1Q9NSA2 647 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 PAK5Q9P286 719 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 FXR1P51114 621 aaKnown RBP eCLIP12.69□□□□□ -0.385e-6■■■□□ 17.2
CDC42BPA-203ENST00000366766 TRIML2Q8N7C3 387 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 FGD4Q96M96 766 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 GPBP1L1Q9HC44 474 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 SLC13A4Q9UKG4 626 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 AKR1B1P15121 316 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 TWF2Q6IBS0 349 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 XAB2Q9HCS7 855 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 H2AFYO75367 372 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 GPSM2P81274 684 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 STK4Q13043 487 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 LRRC23Q53EV4 343 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 THNSL1Q8IYQ7 743 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 PPP1R3GB7ZBB8 358 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 KLHL2O95198 593 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 CTDNEP1O95476 244 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 PPARDQ03181 441 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 PTPAQ15257 358 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 KIF19Q2TAC6 998 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 SMARCAD1Q9H4L7 1026 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 WHRNQ9P202 907 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 VPS9D1Q9Y2B5 631 aa12.69□□□□□ -0.38
CDC42BPA-203ENST00000366766 SPATA31A6Q5VVP1 1343 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 HDAC4P56524 1084 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 CALML6Q8TD86 181 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRAPPC3O43617 180 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 FAM47EQ6ZV65 393 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 CCNJLQ8IV13 435 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 CHP1Q99653 195 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 CD4P01730 458 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 FDPSP14324 419 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RPS12P25398 132 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 NLRP11P59045 1033 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 BTNL9Q6UXG8 535 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RANBP17Q9H2T7 1088 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 ECT2Q9H8V3 914 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 MYMKA6NI61 221 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 PP2D1A8MPX8 630 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 EXTL3O43909 919 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TYK2P29597 1187 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 ANO4Q32M45 955 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 ESYT3A0FGR9 886 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 SERPINB10P48595 397 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 EFL1Q7Z2Z2 1120 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRIM54Q9BYV2 358 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 ING2Q9H160 280 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 PPM1NQ8N819 430 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 EHD4Q9H223 541 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TRIM45Q9H8W5 580 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 SYNPO2Q9UMS6 1093 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TNPO2O14787 897 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 PDE1CQ14123 709 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 PDIA6Q15084 440 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 EIF1ADQ8N9N8 165 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 TBC1D16Q8TBP0 767 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 WDR91A4D1P6 747 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 EEF1DP29692 281 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RECQLP46063 649 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 NCOA4Q13772 614 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 HIC1Q14526 733 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 SWSAP1Q6NVH7 229 aa12.68□□□□□ -0.38
CDC42BPA-203ENST00000366766 RASSF10A6NK89 507 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 DIAPH2O60879 1101 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 YWHAHQ04917 246 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 MTF1Q14872 753 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 TCP11X1B4DZS4 312 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 EIF3EP60228 445 aaKnown RBP12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 OSTNP61366 133 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 TMTC4Q5T4D3 741 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 LRRC8BQ6P9F7 803 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 KCNK16Q96T55 309 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 ZNF518BQ9C0D4 1074 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 NCAPHQ15003 741 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 PASD1Q8IV76 773 aa12.67□□□□□ -0.38
CDC42BPA-203ENST00000366766 HEMGNQ9BXL5 484 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms