RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 CLDN3O15551 220 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 DCXO43602 365 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 GLUD1P00367 558 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 PIGRP01833 764 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 CXCL8P10145 99 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 KCNE1P15382 129 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 RPL17P18621 184 aaKnown RBP11.32□□□□□ -0.6
YBX3-203ENST00000366286 SCP2P22307 547 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 MTHFRP42898 656 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 CREMQ03060 361 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 ELAVL2Q12926 359 aaKnown RBP11.32□□□□□ -0.6
YBX3-203ENST00000366286 UPP1Q16831 310 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 FAM171A1Q5VUB5 890 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 SLC39A4Q6P5W5 647 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 CD300LGQ6UXG3 332 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 SV2BQ7L1I2 683 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 MAP4K3Q8IVH8 894 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 GPR65Q8IYL9 337 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 PDILTQ8N807 584 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 C18orf25Q96B23 403 aaPredicted RBP11.32□□□□□ -0.6
YBX3-203ENST00000366286 NECTIN4Q96NY8 510 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 TTPALQ9BTX7 342 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 PANK2Q9BZ23 570 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.32□□□□□ -0.6
YBX3-203ENST00000366286 SLC38A7Q9NVC3 462 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 FNIP2Q9P278 1114 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 DOCK8Q8NF50 2099 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 KMT2EQ8IZD2 1858 aa11.32□□□□□ -0.6
YBX3-203ENST00000366286 MYO10Q9HD67 2058 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PODXLO00592 558 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 FAM189A1O60320 539 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PPP6R2O75170 966 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 B3GAT3O94766 335 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 MYBP10242 640 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PDIA4P13667 645 aaKnown RBP11.31□□□□□ -0.6
YBX3-203ENST00000366286 ALADP13716 330 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 TNFSF9P41273 254 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 GTF2BQ00403 316 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PSMD5Q16401 504 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
YBX3-203ENST00000366286 HERC4Q5GLZ8 1057 aaPredicted RBP11.31□□□□□ -0.6
YBX3-203ENST00000366286 TMEM31Q5JXX7 168 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 ZBTB41Q5SVQ8 909 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.31□□□□□ -0.6
YBX3-203ENST00000366286 CEP57Q86XR8 500 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PALB2Q86YC2 1186 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 PIK3R5Q8WYR1 880 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 RIPOR3Q96MK2 946 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 ST6GALNAC4Q9H4F1 302 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 TUBGCP4Q9UGJ1 667 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 SCN1AP35498 2009 aa11.31□□□□□ -0.6
YBX3-203ENST00000366286 TRIOO75962 3097 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 C2CD4DB7Z1M9 353 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 TISP43B9A030 160 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 I3L4J1 428 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 OGTO15294 1046 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 TGM5O43548 720 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 CUTAO60888 179 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 PPP1R37O75864 691 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 CLTAP09496 248 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 SPATA31D3P0C874 917 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 IDEP14735 1019 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 FGFR3P22607 806 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 TKTP29401 623 aaKnown RBP11.3□□□□□ -0.6
YBX3-203ENST00000366286 ABCD1P33897 745 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 BRCC3P46736 316 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 PPP2R3AQ06190 1150 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 SPAG1Q07617 926 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 DCLRE1AQ6PJP8 1040 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 SPATA31D4Q6ZUB0 917 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 GPR149Q86SP6 731 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 TMEM130Q8N3G9 435 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 LNX1Q8TBB1 728 aaPredicted RBP11.3□□□□□ -0.6
YBX3-203ENST00000366286 HVCN1Q96D96 273 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
YBX3-203ENST00000366286 CLSTN3Q9BQT9 956 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 LRFN3Q9BTN0 628 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 MSTO1Q9BUK6 570 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 TBC1D7Q9P0N9 293 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 SEL1LQ9UBV2 794 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 NR2E1Q9Y466 385 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 NOTCH4Q99466 2003 aa11.3□□□□□ -0.6
YBX3-203ENST00000366286 TECTAO75443 2155 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 A0A0B4J269 797 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 FRMD3A2A2Y4 597 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 ANKRD63C9JTQ0 380 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 ADAM12O43184 909 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 GPR37L1O60883 481 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 RFPL2O75678 378 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 GAP43P17677 238 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 CASP5P51878 434 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 ENOX2Q16206 610 aaKnown RBP11.29□□□□□ -0.6
YBX3-203ENST00000366286 E2F4Q16254 413 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 KYAT1Q16773 422 aa11.29□□□□□ -0.6
YBX3-203ENST00000366286 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms