RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 APRTP07741 180 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 FAM45BPQ6NSW5 357 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 ANKMY2Q8IV38 441 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 HIC2Q96JB3 615 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 HDHD2Q9H0R4 259 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 BMP3P12645 472 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 CACNB2Q08289 660 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 FAM102AQ5T9C2 384 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 CALML6Q8TD86 181 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 ALBP02768 609 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 TRIM49P0CI25 452 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 TRIM49CP0CI26 452 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 AKIRIN2Q53H80 203 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 SRLQ86TD4 932 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 ZNF804BA4D1E1 1349 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 DDHD2O94830 711 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 ZNF211Q13398 564 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 LRRC24Q50LG9 513 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 IKBIPQ70UQ0 350 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 TMEM35BQ8NCS4 154 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 CLMNQ96JQ2 1002 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 TSEN34Q9BSV6 310 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 TRIM39Q9HCM9 518 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 BFARQ9NZS9 450 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 CDC40O60508 579 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 CMTM5Q96DZ9 223 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 SPATA16Q9BXB7 569 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 DNAJC12Q9UKB3 198 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 MYL2P10916 166 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 NFIL3Q16649 462 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 PGBD3Q8N328 593 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 WNT8AQ9H1J5 351 aa18.17■□□□□ 0.5
CACNA1A-201ENST00000360228 PDE5AO76074 875 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 TBXAS1P24557 533 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 A0A1W2PP64 1363 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 DARSP14868 501 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 EPB42P16452 691 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 GRIK1P39086 918 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 MRPS35P82673 323 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 ASAP3Q8TDY4 903 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 SNRNP27Q8WVK2 155 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 PAGE5Q96GU1 130 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 KLHL20Q9Y2M5 609 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 SEMA3EO15041 775 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 STRNO43815 780 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 ADORA2BP29275 332 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 PUDPQ08623 228 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 SUPT20HL1Q3ZLR7 823 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 TTC33Q6PID6 262 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 USP17L2Q6R6M4 530 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 RNASE11Q8TAA1 199 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 WNK4Q96J92 1243 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 TMA7Q9Y2S6 64 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 PLA2G4AP47712 749 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 ATP6V1G3Q96LB4 118 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 VIPAS39Q9H9C1 493 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 RPRD1BQ9NQG5 326 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 PPEF1O14829 653 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 PRPF39Q86UA1 669 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 THNSL1Q8IYQ7 743 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 EXD1Q8NHP7 514 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 JADE3Q92613 823 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 DDX50Q9BQ39 737 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 CEP72Q9P209 647 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 UBTFL6P0CB48 400 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 BCAR1P56945 870 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 MLPHQ9BV36 600 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 RPS7P62081 194 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 CHRNDQ07001 517 aa18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 ZBTB38Q8NAP3 1195 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-201ENST00000360228 CLASP2O75122 1294 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 KPNB1Q14974 876 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 MDM1Q8TC05 714 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 NDUFS3O75489 264 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 PHKA2P46019 1235 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 CDH6P55285 790 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 MAPK6Q16659 721 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 SLC25A24Q6NUK1 477 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 PIGSQ96S52 555 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 UVRAGQ9P2Y5 699 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 PEX1O43933 1283 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 VSNL1P62760 191 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 MFAP3LO75121 409 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 ARMC3Q5W041 872 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 TSPAN17Q96FV3 270 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 TUFT1Q9NNX1 390 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 SGSM1Q2NKQ1 1148 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 GIMAP8Q8ND71 665 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 PTPRN2Q92932 1015 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 AGAP3Q96P47 875 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 IL12RB1P42701 662 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 DNAL1Q4LDG9 190 aa18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 CDKL3Q8IVW4 592 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-201ENST00000360228 ANKRD27Q96NW4 1050 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms