RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 NR3C1P04150 777 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 PRCPP42785 496 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 POU5F1Q01860 360 aaKnown RBP20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 UBE3AQ05086 875 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 SURF1Q15526 300 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 SNRNP35Q16560 246 aaKnown RBP20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 XKR4Q5GH76 650 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CEP135Q66GS9 1140 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 JADE1Q6IE81 842 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 KLHL10Q6JEL2 608 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 ALKAL1Q6UXT8 129 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TRIML1Q8N9V2 468 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 RABGGTAQ92696 567 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 DDX27Q96GQ7 796 aaKnown RBP20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 IGSF21Q96ID5 467 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 GUCD1Q96NT3 240 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TSPAN18Q96SJ8 248 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 KCTD10Q9H3F6 313 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 ENTPD7Q9NQZ7 604 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 FRMD4BQ9Y2L6 1034 aa20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 R3HCC1Q9Y3T6 440 aaKnown RBP20.8■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TDRD15B5MCY1 1934 aaKnown RBP20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 B4GALT3O60512 393 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 PLCB3Q01970 1234 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 MORC3Q14149 939 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TMC7Q7Z402 723 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CBWD2Q8IUF1 395 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 C12orf56Q8IXR9 622 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 ZSWIM2Q8NEG5 633 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 SPPL3Q8TCT6 385 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 HASPINQ8TF76 798 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CACTINQ8WUQ7 758 aaKnown RBP20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 C18orf25Q96B23 403 aaPredicted RBP20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 ZMAT2Q96NC0 199 aaKnown RBP20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 FNBP1Q96RU3 617 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 GOLGA2P5Q9HBQ8 144 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CACNG4Q9UBN1 327 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 STK39Q9UEW8 545 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 DERAQ9Y315 318 aa20.79■□□□□ 0.92
HLA-DRB1-201ENST00000360004 KIAA1671Q9BY89 1806 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 PODXLO00592 558 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 NFICP08651 508 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 NR2F2P24468 414 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TFAMQ00059 246 aaKnown RBP20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CRELD2Q6UXH1 353 aaPredicted RBP20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 PPP2R3CQ969Q6 453 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 SYAP1Q96A49 352 aaPredicted RBP20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 MRPL38Q96DV4 380 aaKnown RBP20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TLR9Q9NR96 1032 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TUBGCP4Q9UGJ1 667 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TRAF3IP3Q9Y228 551 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 LZTS1Q9Y250 596 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 NUB1Q9Y5A7 615 aa20.78■□□□□ 0.92
HLA-DRB1-201ENST00000360004 B3GAT3O94766 335 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CLSTN1O94985 981 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TMEM191BP0C7N4 346 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 DLATP10515 647 aaKnown RBP20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 RPL9P32969 192 aaKnown RBP20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CLCNKBP51801 687 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 TIGD5Q53EQ6 642 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 COBLL1Q53SF7 1204 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 KIAA1841Q6NSI8 718 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 DCLRE1AQ6PJP8 1040 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 ADSSL1Q8N142 457 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 PPM1EQ8WY54 764 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CCDC127Q96BQ5 260 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 DHTKD1Q96HY7 919 aaPredicted RBP20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 PDE11AQ9HCR9 933 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 LMCD1Q9NZU5 365 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 ADAM28Q9UKQ2 775 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CTNND2Q9UQB3 1225 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 C2CD2Q9Y426 696 aa20.77■□□□□ 0.92
HLA-DRB1-201ENST00000360004 CITO14578 2027 aa20.77■□□□□ 0.91
HLA-DRB1-201ENST00000360004 BICDL2A1A5D9 508 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 CETN3O15182 167 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 MEFVO15553 781 aaPredicted RBP20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 TNNC2P02585 160 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 TNNI1P19237 187 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 CYP3A5P20815 502 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 SOX4Q06945 474 aaPredicted RBP20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 ADAM9Q13443 819 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 ADGRE1Q14246 886 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 MYBPC2Q14324 1141 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 CCDC183Q5T5S1 534 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 PLPP4Q5VZY2 271 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 USP37Q86T82 979 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 DDX53Q86TM3 631 aaKnown RBP20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 TMEM173Q86WV6 379 aaPredicted RBP20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 NT5DC4Q86YG4 428 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 SLC9A9Q8IVB4 645 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 VPS52Q8N1B4 723 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 ANKRD36BP1Q96IX9 119 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 TCF25Q9BQ70 676 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 PAAF1Q9BRP4 392 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 DACH1Q9UI36 760 aa20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 COL4A4P53420 1690 aaPredicted RBP20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 SF3B1O75533 1304 aaKnown RBP eCLIP20.76■□□□□ 0.91
HLA-DRB1-201ENST00000360004 TRAPPC3O43617 180 aa20.75■□□□□ 0.91
HLA-DRB1-201ENST00000360004 KIF4AO95239 1232 aa20.75■□□□□ 0.91
HLA-DRB1-201ENST00000360004 URODP06132 367 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms