RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 NAGPAQ9UK23 515 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 TRIP11Q15643 1979 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 SSU72P8A0A1W2PR75 194 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 ZNF233A6NK53 670 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 H3BRB1 525 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 CLDN3O15551 220 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 HRO43593 1189 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 EXTL3O43909 919 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 MSCO60682 206 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 LCA5LO95447 670 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 VNN1O95497 513 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 C22orf31O95567 290 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 KRT5P13647 590 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 MAP2K2P36507 400 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 RFC5P40937 340 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 HIC1Q14526 733 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 KRT39Q6A163 491 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 RGMBQ6NW40 437 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 ALKBH5Q6P6C2 394 aaKnown RBP5.48□□□□□ -1.53
ATXN3-202ENST00000359366 PLPPR4Q7Z2D5 763 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 SLC30A5Q8TAD4 765 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 SNRNP27Q8WVK2 155 aaKnown RBP5.48□□□□□ -1.53
ATXN3-202ENST00000359366 SYN2Q92777 582 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-202ENST00000359366 IQCDQ96DY2 449 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 FBXL18Q96ME1 805 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 SCLT1Q96NL6 688 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 FNBP1Q96RU3 617 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 EDEM3Q9BZQ6 932 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 CXCL16Q9H2A7 254 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 TUT1Q9H6E5 874 aaKnown RBP5.48□□□□□ -1.53
ATXN3-202ENST00000359366 C17orf75Q9HAS0 396 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 OSGEPQ9NPF4 335 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 ERAP1Q9NZ08 941 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 CDC23Q9UJX2 597 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 MYO6Q9UM54 1294 aa5.48□□□□□ -1.53
ATXN3-202ENST00000359366 A0A0B4J269 797 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ARHGAP33O14559 1287 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 STRNO43815 780 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 HBP1O60381 514 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 AOC2O75106 756 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ZMYND10O75800 440 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 HLA-DRAP01903 254 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MMP3P08254 477 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MMEP08473 750 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CFHP08603 1231 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 PIK3CAP42336 1068 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GUCY2FP51841 1108 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 RTP1P59025 263 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TNFAIP2Q03169 654 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TRIM32Q13049 653 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 PRPF4BQ13523 1007 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 LAMC2Q13753 1193 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ZSCAN26Q16670 478 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 KIZQ2M2Z5 673 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 HSP90B2PQ58FF3 399 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MARCH8Q5T0T0 291 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 IER5Q5VY09 327 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 LLGL2Q6P1M3 1020 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 KCNV1Q6PIU1 500 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 SCARA5Q6ZMJ2 495 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 NOP9Q86U38 636 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CPNE8Q86YQ8 564 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 RPUSD2Q8IZ73 545 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 KLHL23Q8NBE8 558 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 FBXL13Q8NEE6 735 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 PPTC7Q8NI37 304 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 HELQQ8TDG4 1101 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 NLRP7Q8WX94 980 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 UBXN4Q92575 508 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ARHGEF26Q96DR7 871 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 FAM167AQ96KS9 214 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 PCDHB18PQ96TA0 734 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MTMR12Q9C0I1 747 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CCDC113Q9H0I3 377 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CDHR5Q9HBB8 845 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 IFT122Q9HBG6 1241 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TMEM8AQ9HCN3 771 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 VTA1Q9NP79 307 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 RAB20Q9NX57 234 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 SLC45A1Q9Y2W3 748 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 IGKV6-21A0A0C4DH24 114 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GRID2IPA4D2P6 1211 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MYADML2A6NDP7 307 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TMEM110-MUSTN1A8MSY1 372 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 FAM155AB1AL88 458 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TACC1O75410 805 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 SEC31AO94979 1220 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CST3P01034 146 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CXCL8P10145 99 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TNFAIP3P21580 790 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GARTP22102 1010 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MAPK4P31152 587 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GALCP54803 685 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 TFAMQ00059 246 aaKnown RBP5.47□□□□□ -1.53
ATXN3-202ENST00000359366 C2orf54Q08AI8 447 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 CETN1Q12798 172 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 PPFIA1Q13136 1202 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 ORC1Q13415 861 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 GRIK4Q16099 956 aa5.47□□□□□ -1.53
ATXN3-202ENST00000359366 MAPK6Q16659 721 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms