RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KIF22Q14807 665 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 C6orf118Q5T5N4 469 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 RDM1Q8NG50 284 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 SCFD2Q8WU76 684 aa11.93□□□□□ -0.5
SSU72-202ENST00000359060 MAP3K20Q9NYL2 800 aaKnown RBP11.93□□□□□ -0.5
SSU72-202ENST00000359060 PEX10O60683 326 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 OATP04181 439 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 ABCD1P33897 745 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 HSPA9P38646 679 aaKnown RBP11.92□□□□□ -0.5
SSU72-202ENST00000359060 MAGEA9P43362 315 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 PTENP60484 403 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 SNRPFP62306 86 aaKnown RBP11.92□□□□□ -0.5
SSU72-202ENST00000359060 LRRC14Q15048 493 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.92□□□□□ -0.5
SSU72-202ENST00000359060 MAP4K3Q8IVH8 894 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 RSAD2Q8WXG1 361 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 SEMA4DQ92854 862 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 C17orf75Q9HAS0 396 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 DMAC2Q9NW81 257 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 NR2E1Q9Y466 385 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 SCINQ9Y6U3 715 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 MYH7BA7E2Y1 1941 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 BTNL10A8MVZ5 291 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 PLA2G6O60733 806 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 SUPT20HL2P0C7V6 817 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 PTPRAP18433 802 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 DSG3P32926 999 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 MAN1A1P33908 653 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 ADCY2Q08462 1091 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 ZNF699Q32M78 642 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 LRIG3Q6UXM1 1119 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 TADA2BQ86TJ2 420 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 GDAP1Q8TB36 358 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 HVCN1Q96D96 273 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 HES6Q96HZ4 224 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 EPN3Q9H201 632 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 WEE2P0C1S8 567 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
SSU72-202ENST00000359060 PNMA8AQ86V59 439 aaPredicted RBP11.92□□□□□ -0.5
SSU72-202ENST00000359060 RHOT1Q8IXI2 618 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 WNK4Q96J92 1243 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 CALN1Q9BXU9 219 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 MRPL4Q9BYD3 311 aaKnown RBP11.92□□□□□ -0.5
SSU72-202ENST00000359060 UBXN6Q9BZV1 441 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 ZMYM2Q9UBW7 1377 aa11.92□□□□□ -0.5
SSU72-202ENST00000359060 MAST2Q6P0Q8 1798 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 CES2O00748 559 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 RNF8O76064 485 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 FLT3P36888 993 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 NLRP11P59045 1033 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 YWHAEP62258 255 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 TFDP1Q14186 410 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 HADHQ16836 314 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 TMC2Q8TDI7 906 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 ZNF473Q8WTR7 871 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 SEPT1Q8WYJ6 367 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 KREMEN1Q96MU8 473 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 CNOT10Q9H9A5 744 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 PHF20L1A8MW92 1017 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 TBXAS1P24557 533 aaPredicted RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 IREB2P48200 963 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 SPATA33Q96N06 139 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 RPS6KC1Q96S38 1066 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 ELAC2Q9BQ52 826 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 RPF1Q9H9Y2 349 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 TMBIM4Q9HC24 238 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 CNTNAP1P78357 1384 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 TMED2Q15363 201 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 BSNDQ8WZ55 320 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 ACSF2Q96CM8 615 aaPredicted RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 C9orf72Q96LT7 481 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 GMLQ99445 158 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 TRIM6Q9C030 488 aaPredicted RBP11.91□□□□□ -0.5
SSU72-202ENST00000359060 PCSK1NQ9UHG2 260 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 COG5Q9UP83 839 aa11.91□□□□□ -0.5
SSU72-202ENST00000359060 ZNF536O15090 1300 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 GOLGA8MH3BSY2 632 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 CAND2O75155 1236 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 PRKCBP05771 671 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 RALAP11233 206 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 GARTP22102 1010 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 DUOXA2Q1HG44 320 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 ZNF667Q5HYK9 610 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 KDM7AQ6ZMT4 941 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 TMC3Q7Z5M5 1100 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 SPATS2Q86XZ4 545 aaKnown RBP11.9□□□□□ -0.5
SSU72-202ENST00000359060 IQCKQ8N0W5 287 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 APOL6Q9BWW8 343 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 SEMA4AQ9H3S1 761 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 PGK2P07205 417 aa11.9□□□□□ -0.5
SSU72-202ENST00000359060 PSMA2P25787 234 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms