RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 IGKV6-21A0A0C4DH24 114 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 GOLGA6BA6NDN3 693 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 ASB14A6NK59 587 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 FAM155AB1AL88 458 aaPredicted RBP15.98■□□□□ 0.15
GABPB1-202ENST00000359031 ERVK-9P63128 1117 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 BIRC3Q13489 604 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 CUL1Q13616 776 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 CLEC16AQ2KHT3 1053 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 Q3C1V9 767 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 LDLRAD1Q5T700 205 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 ACAD10Q6JQN1 1059 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 BRSK2Q8IWQ3 736 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 EXOC4Q96A65 974 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 ZNF653Q96CK0 615 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 PI4K2AQ9BTU6 479 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 R3HDMLQ9H3Y0 253 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 ZCCHC17Q9NP64 241 aaKnown RBP15.98■□□□□ 0.15
GABPB1-202ENST00000359031 PSD3Q9NYI0 1048 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 VPS18Q9P253 973 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 PTPRJQ12913 1337 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
GABPB1-202ENST00000359031 GOLGA6L10A0A0M3HER8 536 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 UNCXA6NJT0 531 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 BHMG1C9JSJ3 638 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 EDN1P05305 212 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 TBXAS1P24557 533 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 DCAF12L1Q5VU92 463 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 FBXO16Q8IX29 292 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 DHX37Q8IY37 1157 aaKnown RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 MREGQ8N565 214 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 CCDC26Q8TAB7 109 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ZNF564Q8TBZ8 553 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 PRPF31Q8WWY3 499 aaKnown RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 CASKIN2Q8WXE0 1202 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 TRIM11Q96F44 468 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ZBTB45Q96K62 511 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 RNPC3Q96LT9 517 aaKnown RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 GDAP1L1Q96MZ0 367 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 SPATA33Q96N06 139 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 WNT8AQ9H1J5 351 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 RNF186Q9NXI6 227 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 FAN1Q9Y2M0 1017 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 PCDHB2Q9Y5E7 798 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ALG6Q9Y672 507 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 TOM1L1O75674 476 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 VNN1O95497 513 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 SYF2O95926 243 aaKnown RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 CARSP49589 748 aaKnown RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 WNT7BP56706 349 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 DRP2Q13474 957 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 TTLL4Q14679 1199 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 PLCB4Q15147 1175 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 HSDL1Q3SXM5 330 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ALS2CLQ60I27 953 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 LMBRD2Q68DH5 695 aaPredicted RBP15.97■□□□□ 0.15
GABPB1-202ENST00000359031 SMYD5Q6GMV2 418 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ZSWIM1Q9BR11 485 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 NUP85Q9BW27 656 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 AP1M1Q9BXS5 423 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 SMARCAD1Q9H4L7 1026 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ACP6Q9NPH0 428 aa15.97■□□□□ 0.15
GABPB1-202ENST00000359031 ZBTB42B2RXF5 422 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 CLDN3O15551 220 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 SART1O43290 800 aaKnown RBP15.96■□□□□ 0.15
GABPB1-202ENST00000359031 MSCO60682 206 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 FGGP02679 453 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 PRKCBP05771 671 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 MYBL1P10243 752 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 CTNNA2P26232 953 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 MARK3P27448 753 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 CYP2C19P33261 490 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 GJA5P36382 358 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 CCNA1P78396 465 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 LAMTOR4Q0VGL1 99 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 CUL2Q13617 745 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 TFDP1Q14186 410 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 SURF1Q15526 300 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 MAPK6Q16659 721 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 ZBTB41Q5SVQ8 909 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 WDR78Q5VTH9 848 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 PPP1R2P3Q6NXS1 205 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 TRIM72Q6ZMU5 477 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 MAATS1Q7Z4T9 603 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 WDR49Q8IV35 697 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 HINFPQ9BQA5 517 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 DDX47Q9H0S4 455 aaKnown RBP15.96■□□□□ 0.15
GABPB1-202ENST00000359031 AVENQ9NQS1 362 aaPredicted RBP15.96■□□□□ 0.15
GABPB1-202ENST00000359031 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.96■□□□□ 0.15
GABPB1-202ENST00000359031 NFU1Q9UMS0 254 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 SLC45A1Q9Y2W3 748 aa15.96■□□□□ 0.15
GABPB1-202ENST00000359031 ZSCAN5CA6NGD5 496 aaPredicted RBP15.95■□□□□ 0.14
GABPB1-202ENST00000359031 HBP1O60381 514 aa15.95■□□□□ 0.14
GABPB1-202ENST00000359031 HSF2BPO75031 334 aa15.95■□□□□ 0.14
GABPB1-202ENST00000359031 RNF40O75150 1001 aa15.95■□□□□ 0.14
GABPB1-202ENST00000359031 CLTAP09496 248 aa15.95■□□□□ 0.14
GABPB1-202ENST00000359031 UNGP13051 313 aaPredicted RBP15.95■□□□□ 0.14
GABPB1-202ENST00000359031 COMTP21964 271 aa15.95■□□□□ 0.14
GABPB1-202ENST00000359031 PTENP60484 403 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms