RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 CYP2D6P10635 497 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 FAM83BQ5T0W9 1011 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 SYT2Q8N9I0 419 aaPredicted RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 TMA16Q96EY4 203 aaKnown RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 GCOM2Q9BZD3 368 aaPredicted RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 OLFML3Q9NRN5 406 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 ASNSD1Q9NWL6 643 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 ZFYVE16Q7Z3T8 1539 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 ARAP3Q8WWN8 1544 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 PCCAP05165 728 aaPredicted RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 PYGMP11217 842 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 FCER1AP12319 257 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 DNAJB2P25686 324 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 TTLL4Q14679 1199 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 FUT11Q495W5 492 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 BNIPLQ7Z465 357 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 ICA1LQ8NDH6 482 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 GJB4Q9NTQ9 266 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 LMBRD1Q9NUN5 540 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 FANCLQ9NW38 375 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 GGT7Q9UJ14 662 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 CAND2O75155 1236 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 HEATR6Q6AI08 1181 aaKnown RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 MACC1Q6ZN28 852 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 RNF44Q7L0R7 432 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 GATAD2AQ86YP4 633 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 CAAP1Q9H8G2 361 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 KRCC1Q9NPI7 259 aaPredicted RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 RBM7Q9Y580 266 aaKnown RBP10.27□□□□□ -0.77
CHD3-202ENST00000358181 XDHP47989 1333 aa10.27□□□□□ -0.77
CHD3-202ENST00000358181 CYP27B1O15528 508 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 NDUFS3O75489 264 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 MMP10P09238 476 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PTPN1P18031 435 aaKnown RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 GMCL1Q96IK5 515 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 GPR63Q9BZJ6 419 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 TMEM206Q9H813 350 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 ALG13Q9NP73 1137 aaKnown RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 KLHL11Q9NVR0 708 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 SNX8Q9Y5X2 465 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PTPRTO14522 1441 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PRODHO43272 600 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 S100A5P33763 92 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 KYNUQ16719 465 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 TMEM270Q6UE05 265 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 CEP68Q76N32 757 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PPM1NQ8N819 430 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 STKLD1Q8NE28 680 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 NACC2Q96BF6 587 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PGBD4Q96DM1 585 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 CLMNQ96JQ2 1002 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 RHOBTB2Q9BYZ6 727 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 NMRK2Q9NPI5 230 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 E9PBE3 544 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 BIRC5O15392 142 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 TBC1D4O60343 1298 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 RNASEH1O60930 286 aaKnown RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 TRIM16O95361 564 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PSMC3P17980 439 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 CCR4P51679 360 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 COPB1P53618 953 aaKnown RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 PGS1Q32NB8 556 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 YME1L1Q96TA2 773 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 ELL3Q9HB65 397 aaPredicted RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 TRPC4Q9UBN4 977 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 FHOD1Q9Y613 1164 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 GYS2P54840 703 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 SURF1Q15526 300 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 TAF1CQ15572 869 aaPredicted RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 HLA-DQA1Q5Y7H0 255 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 GFM2Q969S9 779 aaKnown RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 TDRKHQ9Y2W6 561 aaKnown RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 NCF1BA6NI72 391 aaPredicted RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 NCF1CA8MVU1 366 aaPredicted RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 TJP3O95049 919 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 NCF1P14598 390 aaPredicted RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 NR1H3Q13133 447 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 CYP4X1Q8N118 509 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 OR8K1Q8NGG5 319 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 S100A13Q99584 98 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 PRRG4Q9BZD6 226 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 BBS7Q8IWZ6 715 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
CHD3-202ENST00000358181 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
CHD3-202ENST00000358181 SAMD9Q5K651 1589 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 GYG2O15488 501 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 NMT2O60551 498 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 TRIM13O60858 407 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 TCN1P20061 433 aaPredicted RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 PSMC6P62333 389 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 DEFB128Q7Z7B8 93 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 NLGN1Q8N2Q7 840 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 CARNMT1Q8N4J0 409 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 SPRTNQ9H040 489 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms