RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 ARHGAP44Q17R89 818 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 KHDC1Q4VXA5 237 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 RNF220Q5VTB9 566 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 C15orf52Q6ZUT6 534 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 ZNF398Q8TD17 642 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 GATA6Q92908 595 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 AZIN2Q96A70 460 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 BHMT2Q9H2M3 363 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 CHST7Q9NS84 486 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 SEPT11Q9NVA2 429 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 STOML1Q9UBI4 398 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 NRXN2Q9P2S2 1712 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 ZNF536O15090 1300 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 USP17L10C9JJH3 530 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 MEIS2O14770 477 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 IRF6O14896 467 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 CLDN3O15551 220 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 LRRN2O75325 713 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 BCRP11274 1271 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 C1orf54Q8WWF1 131 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 STRA6Q9BX79 667 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 VCXQ9H320 206 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 SLCO1B3Q9NPD5 702 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 AGPAT3Q9NRZ7 376 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 DLGAP2Q9P1A6 1054 aa12.9□□□□□ -0.34
SMARCAL1-201ENST00000357276 RASA4BC9J798 803 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 GNPATO15228 680 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 RASA4O43374 803 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 CBX6O95503 412 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 NMT1P30419 496 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 MCCD1P59942 119 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 BFSP1Q12934 665 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 SGO2Q562F6 1265 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 GPATCH4Q5T3I0 446 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 TBC1D9BQ66K14 1250 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF564Q8TBZ8 553 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ASIC3Q9UHC3 531 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 TBK1Q9UHD2 729 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 AP3B2Q13367 1082 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF720Q7Z2F6 126 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ARHGEF19Q8IW93 802 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM20AQ96MK3 541 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 GORASP1Q9BQQ3 440 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 HERPUD2Q9BSE4 406 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 DCLK3Q9C098 648 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 RGL1Q9NZL6 768 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 UVRAGQ9P2Y5 699 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 GAKO14976 1311 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 AKR1B1P15121 316 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ARHGAP4P98171 946 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 EPC2Q52LR7 807 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 BTBD6Q96KE9 485 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 PWWP2AQ96N64 755 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 NUP85Q9BW27 656 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 CADM1Q9BY67 442 aaKnown RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 CHORDC1Q9UHD1 332 aaPredicted RBP12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ANAPC5Q9UJX4 755 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 GTF3C4Q9UKN8 822 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
SMARCAL1-201ENST00000357276 ATRNL1Q5VV63 1379 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM170AA1A519 330 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 H0Y3Z8 333 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 FGFR1P11362 822 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 ADSSP30520 456 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 MYBPC2Q14324 1141 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 GRIPAP1Q4V328 841 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 TAF1BQ53T94 588 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 RFWD3Q6PCD5 774 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 NOP9Q86U38 636 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM71AQ8IYT1 594 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 LRRC8CQ8TDW0 803 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 GRK7Q8WTQ7 553 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 ITFG2Q969R8 447 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 MYH11P35749 1972 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 PDLIM1O00151 329 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 SMAPO00193 183 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 P4HA2O15460 535 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 SPOPO43791 374 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 TYROBPO43914 113 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 CIITAP33076 1130 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 MUM1Q2TAK8 710 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM182BQ5T319 152 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 SNX30Q5VWJ9 437 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 CLNKQ7Z7G1 428 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 NCSTNQ92542 709 aa12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
SMARCAL1-201ENST00000357276 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms