RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 STAT4Q14765 748 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 ZCWPW2Q504Y3 356 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 LVRNQ6Q4G3 990 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 CCDC125Q86Z20 511 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 MAGEB18Q96M61 343 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 KIAA1683Q9H0B3 1180 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 SLC12A4Q9UP95 1085 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
BDNF-202ENST00000356660 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 DPPA5A6NC42 116 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 UNC5CO95185 931 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 FGRP09769 529 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 SERPINB6P35237 376 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 RRP1BQ14684 758 aaKnown RBP13.31□□□□□ -0.28
BDNF-202ENST00000356660 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 ATL2Q8NHH9 583 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 B4GALNT2Q8NHY0 566 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 CYP2W1Q8TAV3 490 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 CKAP2Q8WWK9 683 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 SMYD3Q9H7B4 428 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 SLIT3O75094 1523 aa13.31□□□□□ -0.28
BDNF-202ENST00000356660 F5H6K3 240 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 SLC16A3O15427 465 aaKnown RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 GGPS1O95749 300 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 RPA1P27694 616 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 KDSRQ06136 332 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 INTS5Q6P9B9 1019 aaKnown RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 NLRP9Q7RTR0 991 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 RASGEF1CQ8N431 466 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 STK32AQ8WU08 396 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 CPA5Q8WXQ8 436 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 KAT5Q92993 513 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 NACC1Q96RE7 527 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 TBC1D10AQ9BXI6 508 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 DNAI2Q9GZS0 605 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 TMEM117Q9H0C3 514 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 CHST7Q9NS84 486 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 C1orf112Q9NSG2 853 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 LMNAP02545 664 aaKnown RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 PHBP35232 272 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 POLGP54098 1239 aaPredicted RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 CUL3Q13618 768 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 RASA3Q14644 834 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 MIS18BP1Q6P0N0 1132 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 CYFIP1Q7L576 1253 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 VCX3AQ9NNX9 186 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 RALAP11233 206 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 PGM1P36871 562 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 PTDSS1P48651 473 aaKnown RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 PEX3P56589 373 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 BNIP1Q12981 228 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
BDNF-202ENST00000356660 UBAP2Q5T6F2 1119 aaKnown RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 TTC27Q6P3X3 843 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.3□□□□□ -0.28
BDNF-202ENST00000356660 CEP170P1Q96L14 293 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 EBF2Q9HAK2 575 aa13.3□□□□□ -0.28
BDNF-202ENST00000356660 CORO1CQ9ULV4 474 aaPredicted RBP13.3□□□□□ -0.28
BDNF-202ENST00000356660 EYA4O95677 639 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 KRT1P04264 644 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 INHBAP08476 426 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ABCD1P33897 745 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 BASP1P80723 227 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 NCAPG2Q86XI2 1143 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 LINC00116Q8NCU8 138 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ABTB1Q969K4 478 aaPredicted RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 FERMT1Q9BQL6 677 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 MARCOQ9UEW3 520 aaPredicted RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 RPTORQ8N122 1335 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 M0R2N6 131 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ARL1P40616 181 aaPredicted RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 ARSEP51690 589 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 OSTNP61366 133 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 THOC5Q13769 683 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 COBLL1Q53SF7 1204 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 SNX30Q5VWJ9 437 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 RINT1Q6NUQ1 792 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 CPNE8Q86YQ8 564 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 RIOX1Q9H6W3 641 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 AGPAT3Q9NRZ7 376 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 TXNDC16Q9P2K2 825 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 NEU2Q9Y3R4 380 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 CCDC195A0A1B0GUA6 201 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 ATP9AO75110 1047 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 VHLP40337 213 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 EPHB1P54762 984 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 AOC3Q16853 763 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ARSHQ5FYA8 562 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms