RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 DDX3YO15523 660 aaKnown RBP16.69■□□□□ 0.26
RTN3-205ENST00000356000 GRIN3BO60391 1043 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 PRDM1O75626 825 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 ZBTB7AO95365 584 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 VCLP18206 1134 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 SLC5A2P31639 672 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 KRT72Q14CN4 511 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 PDK3Q15120 406 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 LMBR1LQ6UX01 489 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 ADGRG6Q86SQ4 1221 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 METTL25Q8N6Q8 603 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 KIAA0895Q8NCT3 520 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 GIPC3Q8TF64 312 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 TRIM9Q9C026 710 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 FHDC1Q9C0D6 1143 aaPredicted RBP16.69■□□□□ 0.26
RTN3-205ENST00000356000 ANKRD2Q9GZV1 360 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 DRC3Q9H069 523 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 CTDP1Q9Y5B0 961 aaPredicted RBP16.69■□□□□ 0.26
RTN3-205ENST00000356000 GPC6Q9Y625 555 aaPredicted RBP16.69■□□□□ 0.26
RTN3-205ENST00000356000 C5P01031 1676 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 CCT8P50990 548 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 LRRC15Q8TF66 581 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 HEPHQ9BQS7 1158 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 LSM14BQ9BX40 385 aaKnown RBP16.69■□□□□ 0.26
RTN3-205ENST00000356000 NAPBQ9H115 298 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 GBA3Q9H227 469 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 MAGEF1Q9HAY2 307 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 PLGRKTQ9HBL7 147 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 TRIM17Q9Y577 477 aa16.69■□□□□ 0.26
RTN3-205ENST00000356000 HAUS5O94927 633 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 ACSL3O95573 720 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 CLPTM1O96005 669 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 BORAQ6PGQ7 559 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
RTN3-205ENST00000356000 NET1Q7Z628 596 aaPredicted RBP16.68■□□□□ 0.26
RTN3-205ENST00000356000 ADAT2Q7Z6V5 191 aaKnown RBP16.68■□□□□ 0.26
RTN3-205ENST00000356000 SRRM1Q8IYB3 904 aaKnown RBP16.68■□□□□ 0.26
RTN3-205ENST00000356000 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.68■□□□□ 0.263e-7■■■□□ 19.1
RTN3-205ENST00000356000 COX4I2Q96KJ9 171 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 PHF12Q96QT6 1004 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 SPZ1Q9BXG8 430 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 UBN1Q9NPG3 1134 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 PCYOX1Q9UHG3 505 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 NAGPAQ9UK23 515 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.68■□□□□ 0.26
RTN3-205ENST00000356000 MAGEC1O60732 1142 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 XIAPP98170 497 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 PTK2Q05397 1052 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 MSLNQ13421 630 aaPredicted RBP16.68■□□□□ 0.26
RTN3-205ENST00000356000 TGFBIQ15582 683 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 CLUL1Q15846 466 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 PDK4Q16654 411 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 TMEM132AQ24JP5 1023 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 CNNM4Q6P4Q7 775 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 LRRC6Q86X45 466 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 PEX5LQ8IYB4 626 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 ZNF654Q8IZM8 581 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 ANKRD35Q8N283 1001 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 SPATA5Q8NB90 893 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 C7orf25Q9BPX7 421 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 GPAMQ9HCL2 828 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 SELENONQ9NZV5 590 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 GIT1Q9Y2X7 761 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
RTN3-205ENST00000356000 ALAS1P13196 640 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 CHRNA3P32297 505 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 PGM1P36871 562 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 ZAP70P43403 619 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TNIP1Q15025 636 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 ZNF423Q2M1K9 1284 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 MYLK3Q32MK0 819 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TMCO4Q5TGY1 634 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 RSPH3Q86UC2 560 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 C18orf8Q96DM3 657 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TTC1Q99614 292 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TANGO6Q9C0B7 1094 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 SENP6Q9GZR1 1112 aaPredicted RBP16.67■□□□□ 0.26
RTN3-205ENST00000356000 CCPG1Q9ULG6 757 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TTLL3Q9Y4R7 772 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 FUOMA2VDF0 154 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 DKC1O60832 514 aaKnown RBP eCLIP16.67■□□□□ 0.26
RTN3-205ENST00000356000 TATP17735 454 aaPredicted RBP16.67■□□□□ 0.26
RTN3-205ENST00000356000 CASP7P55210 303 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TRMT5Q32P41 509 aaKnown RBP16.67■□□□□ 0.26
RTN3-205ENST00000356000 ANKRD20A4Q4UJ75 823 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 SFT2D3Q587I9 215 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 MAP3K21Q5TCX8 1036 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 ALKBH5Q6P6C2 394 aaKnown RBP16.67■□□□□ 0.26
RTN3-205ENST00000356000 DHRS4L2Q6PKH6 230 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
RTN3-205ENST00000356000 CCDC25Q86WR0 208 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 DENND1AQ8TEH3 1009 aa16.67■□□□□ 0.26
RTN3-205ENST00000356000 ZFRQ96KR1 1074 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms