RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 SLC52A2Q9HAB3 445 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 GPCPD1Q9NPB8 672 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 PFDN4Q9NQP4 134 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 TAS2R1Q9NYW7 299 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 POLIQ9UNA4 740 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 NAALADL1Q9UQQ1 740 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 MTO1Q9Y2Z2 717 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.17□□□□□ -1.1
CCR9-201ENST00000355983 CASQ2O14958 399 aaPredicted RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 OPHN1O60890 802 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 CIB2O75838 187 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 STK10O94804 968 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 PLEKHA8P1O95397 391 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 IGHMBP2P38935 993 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 CDK18Q07002 472 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 SLC39A6Q13433 755 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 THOC5Q13769 683 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 TBCCQ15814 346 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 EDRF1Q3B7T1 1238 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 DNAL1Q4LDG9 190 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 CCDC137Q6PK04 289 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 MIGA2Q7L4E1 593 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 TRABD2AQ86V40 505 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 ERI1Q8IV48 349 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 UBL4BQ8N7F7 174 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 ENAHQ8N8S7 591 aaPredicted RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 NMD3Q96D46 503 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 CALML4Q96GE6 196 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 LRRC19Q9H756 370 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 NLRP2Q9NX02 1062 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 MTUS1Q9ULD2 1270 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 ASAP1Q9ULH1 1129 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 SYNPO2Q9UMS6 1093 aa8.17□□□□□ -1.1
CCR9-201ENST00000355983 FAM32AQ9Y421 112 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 HBS1LQ9Y450 684 aaKnown RBP8.17□□□□□ -1.1
CCR9-201ENST00000355983 SORBS3O60504 671 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 LGR5O75473 907 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TM7SF2O76062 418 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 HALP42357 657 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 VPS41P49754 854 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 GALK1P51570 392 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 RELAQ04206 551 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 MYBPC2Q14324 1141 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 MAP7D1Q3KQU3 841 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TMEM63BQ5T3F8 832 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 UBAP2Q5T6F2 1119 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 CCDC62Q6P9F0 684 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 FAM47EQ6ZV65 393 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 OTUD6AQ7L8S5 288 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 MTDHQ86UE4 582 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 LRRC6Q86X45 466 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 RHOT2Q8IXI1 618 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 ABTB2Q8N961 1025 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 KCNH5Q8NCM2 988 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 FAM172AQ8WUF8 416 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 SGF29Q96ES7 293 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CCT7Q99832 543 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 C1orf21Q9H246 121 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 GOLPH3Q9H4A6 298 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 ZNF696Q9H7X3 374 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 ARL8BQ9NVJ2 186 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 ARHGEF38Q9NXL2 777 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CLIC5Q9NZA1 410 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TRAF3IP3Q9Y228 551 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 WASF2Q9Y6W5 498 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 GTPBP10A4D1E9 387 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 ATP5J2-PTCD1G3V325 749 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 SLC26A4O43511 780 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PTCD1O75127 700 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 TFAP2AP05549 437 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CSF1RP07333 972 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PDGFRBP09619 1106 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 OR52Z1P0C646 297 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 UCHL3P15374 230 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PGM1P36871 562 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 GALCP54803 685 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CDK16Q00536 496 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 DNAJC3Q13217 504 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 LPIN1Q14693 890 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 KIF22Q14807 665 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 DLGAP5Q15398 846 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 IFIT1BQ5T764 474 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 TTC27Q6P3X3 843 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 OTOAQ7RTW8 1153 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TMEM126BQ8IUX1 230 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 AHI1Q8N157 1196 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 BBOF1Q8ND07 529 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PPP1R14CQ8TAE6 165 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 C18orf8Q96DM3 657 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 EEF2KMTQ96G04 330 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 ZNF594Q96JF6 807 aaPredicted RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 EBF3Q9H4W6 596 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 HDAC9Q9UKV0 1011 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TMEM2Q9UHN6 1383 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CCDC194A0A1B0GVG4 234 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PP2D1A8MPX8 630 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TP73O15350 636 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 TRMUO75648 421 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 KRT13P13646 458 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms