RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 BMP15O95972 392 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 CXCL8P10145 99 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 FGFR3P22607 806 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 MCL1Q07820 350 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 PSMD5Q16401 504 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 ZC2HC1CQ53FD0 456 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 ST13P5Q8NFI4 369 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 TCHPQ9BT92 498 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 KCND2Q9NZV8 630 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 LIMD1Q9UGP4 676 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 ODF2LQ9ULJ1 636 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 COL4A3Q01955 1670 aa18.31■□□□□ 0.52
PDLIM7-201ENST00000355572 K7ENM7 598 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 SLC26A4O43511 780 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 STX6O43752 255 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 B3GAT3O94766 335 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 KCNE1P15382 129 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 PDCP20941 246 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 GUCY2FP51841 1108 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 FOXD4L5Q5VV16 416 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 ZPBP2Q6X784 338 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 GPR65Q8IYL9 337 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 MYCT1Q8N699 235 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 KREMEN2Q8NCW0 462 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 CMASQ8NFW8 434 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 FOXD4L4Q8WXT5 416 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 KCNN1Q92952 543 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 ACAP3Q96P50 834 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 FGFBP2Q9BYJ0 223 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 FBXW11Q9UKB1 542 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 TBX20Q9UMR3 447 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 SSX2IPQ9Y2D8 614 aa18.3■□□□□ 0.52
PDLIM7-201ENST00000355572 TCHHQ07283 1943 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 MYMKA6NI61 221 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 ANKRD63C9JTQ0 380 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 PODXLO00592 558 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 FAM13AO94988 1023 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 NTHL1P78549 312 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 STRN3Q13033 797 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 PKP1Q13835 747 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 C15orf39Q6ZRI6 1047 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 DYMQ7RTS9 669 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 TDRD5Q8NAT2 981 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 SNX21Q969T3 373 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 MYADMQ96S97 322 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 LARSQ9P2J5 1176 aaKnown RBP18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 MTRRQ9UBK8 725 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 NR2E1Q9Y466 385 aa18.29■□□□□ 0.52
PDLIM7-201ENST00000355572 PPEF2O14830 753 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 TRAK2O60296 914 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 PIGRP01833 764 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 DDIT3P35638 169 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 SMTNP53814 917 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 YARSP54577 528 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 VCPP55072 806 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 SIGLEC14Q08ET2 396 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 SLC39A14Q15043 492 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 IER5LQ5T953 404 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 POTEHQ6S545 545 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 CCDC149Q6ZUS6 474 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 SFR1Q86XK3 245 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 RSAD2Q8WXG1 361 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 SMG7Q92540 1137 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 ZHX3Q9H4I2 956 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 PARVGQ9HBI0 331 aa18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 WDR6Q9NNW5 1121 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 TFIP11Q9UBB9 837 aaKnown RBP18.28■□□□□ 0.52
PDLIM7-201ENST00000355572 CLUHO75153 1309 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 TTC26A0AVF1 554 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 ZMYND10O75800 440 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 OR1D2P34982 312 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 NASPP49321 788 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 KCNA1Q09470 495 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 ENOX2Q16206 610 aaKnown RBP18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 ZSWIM2Q8NEG5 633 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 RASSF8Q8NHQ8 419 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 TOPORSQ9NS56 1045 aaPredicted RBP18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 USTQ9Y2C2 406 aa18.27■□□□□ 0.52
PDLIM7-201ENST00000355572 LACTBL1A8MY62 500 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 NRG2O14511 850 aaPredicted RBP18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 CLDN3O15551 220 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 TBC1D4O60343 1298 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 PPP1R37O75864 691 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 KRT18P05783 430 aaKnown RBP18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 PLA2G5P39877 138 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 CASP5P51878 434 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 WNT7BP56706 349 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 GTF2BQ00403 316 aa18.26■□□□□ 0.51
PDLIM7-201ENST00000355572 ZBTB6Q15916 424 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms