RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 FGF18O76093 207 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 NR3C1P04150 777 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 ITGB1P05556 798 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 OR1G1P47890 313 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 PLCB3Q01970 1234 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 SNRNP35Q16560 246 aaKnown RBP15.14■□□□□ 0.01
SEC13-202ENST00000350697 ZCWPW2Q504Y3 356 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 CBWD2Q8IUF1 395 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 GDPD5Q8WTR4 605 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 KIF12Q96FN5 646 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 DHTKD1Q96HY7 919 aaPredicted RBP15.14■□□□□ 0.01
SEC13-202ENST00000350697 UROC1Q96N76 676 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 MTMR10Q9NXD2 777 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 UBQLN1Q9UMX0 589 aaKnown RBP15.14■□□□□ 0.01
SEC13-202ENST00000350697 DERAQ9Y315 318 aa15.14■□□□□ 0.01
SEC13-202ENST00000350697 CASTOR2A6NHX0 329 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 RFXAPO00287 272 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 XPOTO43592 962 aaKnown RBP15.13■□□□□ 0.01
SEC13-202ENST00000350697 RPL13P26373 211 aaKnown RBP15.13■□□□□ 0.01
SEC13-202ENST00000350697 KRT17Q04695 432 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 UBE3AQ05086 875 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 SPAG1Q07617 926 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 ZBTB6Q15916 424 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 SKOR2Q2VWA4 1001 aaPredicted RBP15.13■□□□□ 0.01
SEC13-202ENST00000350697 EDRF1Q3B7T1 1238 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 CCDC183Q5T5S1 534 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 JADE1Q6IE81 842 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 RBM43Q6ZSC3 357 aaKnown RBP15.13■□□□□ 0.01
SEC13-202ENST00000350697 NT5DC4Q86YG4 428 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 TMEM169Q96HH4 297 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 IGSF21Q96ID5 467 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 TSG101Q99816 390 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 COLEC11Q9BWP8 271 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
SEC13-202ENST00000350697 PRG3Q9Y2Y8 225 aaPredicted RBP15.13■□□□□ 0.01
SEC13-202ENST00000350697 C2CD2Q9Y426 696 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 CDH23Q9H251 3354 aa15.13■□□□□ 0.01
SEC13-202ENST00000350697 PPP1R3GB7ZBB8 358 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 GRM6O15303 877 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 LPXNO60711 386 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 NFICP08651 508 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 CD44P16070 742 aaKnown RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 CYP3A5P20815 502 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 NR2F2P24468 414 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 CCNE1P24864 410 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 LRRC63Q05C16 580 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 SOX4Q06945 474 aaPredicted RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 ADAM9Q13443 819 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 TMEM132DQ14C87 1099 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 SURF1Q15526 300 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 TMEM173Q86WV6 379 aaPredicted RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 RDH13Q8NBN7 331 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 SPPL3Q8TCT6 385 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 C18orf25Q96B23 403 aaPredicted RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 DDX27Q96GQ7 796 aaKnown RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 GUCD1Q96NT3 240 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 GAS2L1Q99501 681 aaPredicted RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 CDX2Q99626 313 aaPredicted RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 PAAF1Q9BRP4 392 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 LMAN2LQ9H0V9 348 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 GOLGA2P5Q9HBQ8 144 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 PUF60Q9UHX1 559 aaKnown RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 LZTS1Q9Y250 596 aa15.12■□□□□ 0.01
SEC13-202ENST00000350697 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
SEC13-202ENST00000350697 PLXNA4Q9HCM2 1894 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 RPL9P32969 192 aaKnown RBP15.11■□□□□ 0.01
SEC13-202ENST00000350697 CLCNKBP51801 687 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 WNT7BP56706 349 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 CYP24A1Q07973 514 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 PTPROQ16827 1216 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 UPP1Q16831 310 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 SPATA1Q5VX52 437 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 KLHL10Q6JEL2 608 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 EFCAB13Q8IY85 973 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 MLKLQ8NB16 471 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 BEST2Q8NFU1 509 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 BCL7CQ8WUZ0 217 aaPredicted RBP15.11■□□□□ 0.01
SEC13-202ENST00000350697 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
SEC13-202ENST00000350697 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 PDE11AQ9HCR9 933 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 MARCH5Q9NX47 278 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 LMCD1Q9NZU5 365 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 CACNG4Q9UBN1 327 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 STK39Q9UEW8 545 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 TUBGCP4Q9UGJ1 667 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 FRMD4BQ9Y2L6 1034 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 MYO7AQ13402 2215 aa15.11■□□□□ 0.01
SEC13-202ENST00000350697 BICDL2A1A5D9 508 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 PODXLO00592 558 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 CETN3O15182 167 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 MAPK13O15264 365 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 POU3F3P20264 500 aaPredicted RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 LRPAP1P30533 357 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 CASP4P49662 377 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 PMS1P54277 932 aaKnown RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
SEC13-202ENST00000350697 ADGRE1Q14246 886 aa15.1■□□□□ 0.01
SEC13-202ENST00000350697 PSMD6Q15008 389 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms