RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 AGAP1Q9UPQ3 857 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 BTAF1O14981 1849 aa12.92□□□□□ -0.34
SMAD9-201ENST00000350148 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 MCF2P10911 925 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 ACTN1P12814 892 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 AXLP30530 894 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 CXCR5P32302 372 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 HPDP32754 393 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 ACADSBP45954 432 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 LRRN4CLQ8ND94 238 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 MBOAT7Q96N66 472 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 ZNF518BQ9C0D4 1074 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 PIGHQ14442 188 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 CCDC92Q53HC0 331 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 PCSK9Q8NBP7 692 aaKnown RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 DNAJC19Q96DA6 116 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 FMO2Q99518 471 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 AIPL1Q9NZN9 384 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 TYW5A2RUC4 315 aaKnown RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 A8MXQ7 604 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 ATP11AP98196 1134 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 UAP1Q16222 522 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 PLPPR4Q7Z2D5 763 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 FBXO16Q8IX29 292 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 AFAP1L2Q8N4X5 818 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 FAM129AQ9BZQ8 928 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 CYP3A43Q9HB55 503 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 PFDN6O15212 129 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 MAP7Q14244 749 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 TSNAXIP1Q2TAA8 658 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 CCDC38Q502W7 563 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 NME8Q8N427 588 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 ZNF541Q9H0D2 1346 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 GARSP41250 739 aaKnown RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 MXRA7P84157 204 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 SF3A3Q12874 501 aaKnown RBP eCLIP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 CUL2Q13617 745 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 ADAT2Q7Z6V5 191 aaKnown RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 REXO1L1PQ8IX06 675 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 RCOR2Q8IZ40 523 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 GBP7Q8N8V2 638 aaPredicted RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 C18orf8Q96DM3 657 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 FBXL5Q9UKA1 691 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
SMAD9-201ENST00000350148 FAN1Q9Y2M0 1017 aa12.91□□□□□ -0.34
SMAD9-201ENST00000350148 RPS6KA5O75582 802 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 AKAP3O75969 853 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 PGK2P07205 417 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 PTPROQ16827 1216 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 WDR72Q3MJ13 1102 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 KIAA1841Q6NSI8 718 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
SMAD9-201ENST00000350148 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 GMLQ99445 158 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
SMAD9-201ENST00000350148 TJP1Q07157 1748 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 PPP1R11O60927 126 aaPredicted RBP12.9□□□□□ -0.34
SMAD9-201ENST00000350148 TADA3O75528 432 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 APPL2Q8NEU8 664 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 REPS2Q8NFH8 660 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 DNAJC18Q9H819 358 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 CNOT10Q9H9A5 744 aaKnown RBP12.9□□□□□ -0.34
SMAD9-201ENST00000350148 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 NFKBIEO00221 500 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 GTF2BQ00403 316 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 LRRC71Q8N4P6 559 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 INPP4AQ96PE3 977 aaPredicted RBP12.9□□□□□ -0.34
SMAD9-201ENST00000350148 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
SMAD9-201ENST00000350148 NDUFAB1O14561 156 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 ATP1A1P05023 1023 aaKnown RBP12.9□□□□□ -0.35
SMAD9-201ENST00000350148 ITGA4P13612 1032 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 CYP2C19P33261 490 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 ZBTB16Q05516 673 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 NNTQ13423 1086 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 CELF3Q5SZQ8 465 aaKnown RBP12.9□□□□□ -0.35
SMAD9-201ENST00000350148 CASC4Q6P4E1 433 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.35
SMAD9-201ENST00000350148 SLC35G2Q8TBE7 412 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 WDR24Q96S15 920 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 MMTAG2Q9BU76 263 aaKnown RBP12.9□□□□□ -0.35
SMAD9-201ENST00000350148 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 RRAGCQ9HB90 399 aa12.9□□□□□ -0.35
SMAD9-201ENST00000350148 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ADCY3O60266 1144 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 CDR2Q01850 454 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 TTC25Q96NG3 672 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 SH2D3AQ9BRG2 576 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ADORA2AP29274 412 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 LAMTOR4Q0VGL1 99 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 PORCNQ9H237 461 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms