RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CLTAP09496 248 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 SRGAP2CP0DJJ0 459 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 TNNI1P19237 187 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 TNFSF9P41273 254 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 NOP2P46087 812 aaKnown RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 HUNKP57058 714 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 RPS6KA1Q15418 735 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 CFAP221Q4G0U5 840 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 WDR44Q5JSH3 913 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 BEND6Q5SZJ8 279 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 ATF7IP2Q5U623 682 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 EEF1DP3Q658K8 133 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 LMBRD2Q68DH5 695 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 CHADLQ6NUI6 762 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 MTHFD1LQ6UB35 978 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 C17orf99Q6UX52 265 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF677Q86XU0 584 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 RHPN2Q8IUC4 686 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 RHOT2Q8IXI1 618 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 SYCE1Q8N0S2 351 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 RASGEF1CQ8N431 466 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 SLC35G2Q8TBE7 412 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 ACTRT1Q8TDG2 376 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 CTNNBL1Q8WYA6 563 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 ZBTB10Q96DT7 871 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 HES6Q96HZ4 224 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 THAP2Q9H0W7 228 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 MINDY3Q9H8M7 445 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 C1orf112Q9NSG2 853 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 PRMT7Q9NVM4 692 aaPredicted RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 SLC5A4Q9NY91 659 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 OGFRQ9NZT2 677 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 ANKFY1Q9P2R3 1169 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 TMEM59LQ9UK28 342 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 COG5Q9UP83 839 aa7.44□□□□□ -1.22
TRIM55-203ENST00000350034 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
TRIM55-203ENST00000350034 PLXNB2O15031 1838 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ZNFX1Q9P2E3 1918 aaKnown RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 A6NJR5 290 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 TMCO5BA8MYB1 307 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 H3BRB1 525 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 GPR25O00155 361 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 MAP2K7O14733 419 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 DDX3YO15523 660 aaKnown RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 B4GALT5O43286 388 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ADCY6O43306 1168 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 TBC1D8O95759 1140 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ASS1P00966 412 aaKnown RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CYP1A1P04798 512 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 RHOXF2BP0C7M4 288 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 IQCF3P0C7M6 154 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF865P0CJ78 1059 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 UNGP13051 313 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 TBXAS1P24557 533 aaPredicted RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CXCR5P32302 372 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 USP8P40818 1118 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PIK3CAP42336 1068 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PAFAH1B1P43034 410 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PHKA2P46019 1235 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PDE6CP51160 858 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF132P52740 706 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 BPIFB4P59827 614 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 VSNL1P62760 191 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 GPC5P78333 572 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 C2orf54Q08AI8 447 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 BIRC3Q13489 604 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CUL2Q13617 745 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 NCOA4Q13772 614 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 LONRF2Q1L5Z9 754 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CLEC16AQ2KHT3 1053 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 SEZ6Q53EL9 994 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 GLE1Q53GS7 698 aaKnown RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 MARCH8Q5T0T0 291 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 OLFML2BQ68BL8 750 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 SCARA3Q6AZY7 606 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ACAD10Q6JQN1 1059 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 C11orf63Q6NUN7 778 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 PEX26Q7Z412 305 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ZBTB33Q86T24 672 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 METTL13Q8N6R0 699 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 OR6J1Q8NGC5 347 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CAGE1Q8TC20 777 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ELMO3Q96BJ8 720 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 NLRP4Q96MN2 994 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ARID3AQ99856 593 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 RHOXF2Q9BQY4 288 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 FUT8Q9BYC5 575 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 UBXN6Q9BZV1 441 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CDT1Q9H211 546 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 TUT1Q9H6E5 874 aaKnown RBP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ARFGAP3Q9NP61 516 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 OSGEPQ9NPF4 335 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 ACP6Q9NPH0 428 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.43□□□□□ -1.22
TRIM55-203ENST00000350034 SMARCAL1Q9NZC9 954 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 CPA4Q9UI42 421 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 GJD2Q9UKL4 321 aa7.43□□□□□ -1.22
TRIM55-203ENST00000350034 GTF3C4Q9UKN8 822 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms