RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 TNNI1P19237 187 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 SLC2A5P22732 501 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 VAMP1P23763 118 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 SLC8A1P32418 973 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 RPS6KA1Q15418 735 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 FAM209BQ5JX69 171 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 NUP88Q99567 741 aaPredicted RBP6.36□□□□□ -1.39
RFC1-201ENST00000349703 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 LY86O95711 162 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 SYPP08247 313 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 OSTNP61366 133 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 MGAT5Q09328 741 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 ARMC3Q5W041 872 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 FAM173BQ6P4H8 233 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 RASGEF1AQ8N9B8 481 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 SSH3Q8TE77 659 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 ALS2CR12Q96Q35 445 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 THUMPD3Q9BV44 507 aaKnown RBP6.36□□□□□ -1.39
RFC1-201ENST00000349703 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 ABCF2Q9UG63 623 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 MAPRE3Q9UPY8 281 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 MYO3AQ8NEV4 1616 aa6.36□□□□□ -1.39
RFC1-201ENST00000349703 EDC4Q6P2E9 1401 aaKnown RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 WDR64B1ANS9 1081 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CFLARO15519 480 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 FZD6O60353 706 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ASLP04424 464 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 TMEM11P17152 192 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CD33P20138 364 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 PTGIRP43119 386 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 IFFO1Q0D2I5 559 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 FRG1Q14331 258 aaKnown RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 RRS1Q15050 365 aaKnown RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 SPA17Q15506 151 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ARHGAP44Q17R89 818 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 DGKHQ86XP1 1220 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 TMTC1Q8IUR5 882 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 NUDCD3Q8IVD9 361 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 TMEM40Q8WWA1 233 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CASP10Q92851 521 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 BBS4Q96RK4 519 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 IQCGQ9H095 443 aaKnown RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 LZTFL1Q9NQ48 299 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ZNF70Q9UC06 446 aaPredicted RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 ATP7AQ04656 1500 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 LRRC7Q96NW7 1537 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ATP10DQ9P241 1426 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 PLD2O14939 933 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 MMP20O60882 483 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 PGM3O95394 542 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 GSTO1P78417 241 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 TAF7Q15545 349 aaPredicted RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 SYT16Q17RD7 645 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 RINT1Q6NUQ1 792 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 POMGNT2Q8NAT1 580 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 MLKLQ8NB16 471 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 MKL1Q969V6 931 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 RGMAQ96B86 450 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CAPS2Q9BXY5 557 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 MANSC1Q9H8J5 431 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 DBNDD1Q9H9R9 158 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 RABL2AQ9UBK7 228 aaPredicted RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 SRP68Q9UHB9 627 aaKnown RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 SCOCQ9UIL1 159 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CPSF3Q9UKF6 684 aaKnown RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 PNPLA6Q8IY17 1366 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 PLEKHG2Q9H7P9 1386 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CDK12Q9NYV4 1490 aaPredicted RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 A0A1B0GTH6 734 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 SEPT4O43236 478 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 CLCQ05315 142 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 RESTQ13127 1097 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 PTK6Q13882 451 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ARHGEF6Q15052 776 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 C1orf141Q5JVX7 400 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 VSTM4Q8IW00 320 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ETFBKMTQ8IXQ9 262 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ZBTB38Q8NAP3 1195 aaPredicted RBP6.35□□□□□ -1.39
RFC1-201ENST00000349703 MTRQ99707 1265 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 VIPAS39Q9H9C1 493 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 PCDHA6Q9UN73 950 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 STK38LQ9Y2H1 464 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 AATKQ6ZMQ8 1374 aa6.35□□□□□ -1.39
RFC1-201ENST00000349703 ARPC4-TTLL3A0A0A6YYG9 625 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 A0A1B0GVL5 298 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 A8MXQ7 604 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 HSPA1LP34931 641 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 CYLC1P35663 651 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 IFNAR2P48551 515 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 RPL6Q02878 288 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 TBCCQ15814 346 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 UNC5AQ6ZN44 842 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 UBE3BQ7Z3V4 1068 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 ZC3H18Q86VM9 953 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 DHX40Q8IX18 779 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 MAFAQ8NHW3 353 aaPredicted RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 LRTOMTQ8WZ04 291 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 KCNN1Q92952 543 aa6.34□□□□□ -1.39
RFC1-201ENST00000349703 GTPBP3Q969Y2 492 aaKnown RBP6.34□□□□□ -1.39
RFC1-201ENST00000349703 THAP11Q96EK4 314 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms