RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SMAPO00193 183 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 LGR5O75473 907 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 EYA4O95677 639 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 ALDH1B1P30837 517 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 CUL3Q13618 768 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 AOC3Q16853 763 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 KHDC1Q4VXA5 237 aaKnown RBP19.88■□□□□ 0.77
SCARF1-202ENST00000348987 WASHC2DQ5SRD0 308 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 SYDE2Q5VT97 1194 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 IRGCQ6NXR0 463 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 TATDN1Q6P1N9 297 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 ARHGAP22Q7Z5H3 698 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 FGD4Q96M96 766 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 CTTNBP2NLQ9P2B4 639 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 SCOCQ9UIL1 159 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 MAPK13O15264 365 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 TNFAIP3P21580 790 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 RANBP1P43487 201 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 ABCB5Q2M3G0 1257 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 ZSWIM1Q9BR11 485 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 SLCO1B3Q9NPD5 702 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 TYW1Q9NV66 732 aaKnown RBP19.88■□□□□ 0.77
SCARF1-202ENST00000348987 DNAJC12Q9UKB3 198 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 USP20Q9Y2K6 914 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 RABGAP1Q9Y3P9 1069 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 USH1CQ9Y6N9 552 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 ANKRD62A6NC57 917 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 TBX3O15119 743 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 SEL1L2Q5TEA6 688 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 RINT1Q6NUQ1 792 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 LRRC8CQ8TDW0 803 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 TDRD3Q9H7E2 651 aaKnown RBP19.87■□□□□ 0.77
SCARF1-202ENST00000348987 DCLRE1BQ9H816 532 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 PHTF1Q9UMS5 762 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 CALUO43852 315 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-202ENST00000348987 ECE2O60344 883 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 TTC4O95801 387 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 ZNF76P36508 570 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 WDR4P57081 412 aaKnown RBP19.87■□□□□ 0.77
SCARF1-202ENST00000348987 MIGA2Q7L4E1 593 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 TPH2Q8IWU9 490 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 FAM20AQ96MK3 541 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 SYT11Q9BT88 431 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 WDR18Q9BV38 432 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 TMX4Q9H1E5 349 aaPredicted RBP19.87■□□□□ 0.77
SCARF1-202ENST00000348987 NAALADL1Q9UQQ1 740 aa19.87■□□□□ 0.77
SCARF1-202ENST00000348987 IGLV3-22A0A075B6J6 115 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 SIGLEC16A6NMB1 481 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 TBCAO75347 108 aaKnown RBP19.86■□□□□ 0.77
SCARF1-202ENST00000348987 ECE1P42892 770 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 RFWD3Q6PCD5 774 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 TMEM179Q6ZVK1 233 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 PWWP2AQ96N64 755 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 QSER1Q2KHR3 1735 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 ZMYM2Q9UBW7 1377 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 MIF4GDA9UHW6 222 aaKnown RBP19.86■□□□□ 0.77
SCARF1-202ENST00000348987 ATP9AO75110 1047 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 ECEL1O95672 775 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 CHRNB2P17787 502 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 COMTP21964 271 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 IL9RQ01113 521 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 MESDQ14696 234 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 CCDC6Q16204 474 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 C7orf43Q8WVR3 580 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 RBM41Q96IZ5 413 aaKnown RBP19.86■□□□□ 0.77
SCARF1-202ENST00000348987 FAM210AQ96ND0 272 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 STK33Q9BYT3 514 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 PDGFDQ9GZP0 370 aaPredicted RBP19.86■□□□□ 0.77
SCARF1-202ENST00000348987 METTL5Q9NRN9 209 aaKnown RBP19.86■□□□□ 0.77
SCARF1-202ENST00000348987 BCS1LQ9Y276 419 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 LRCH1Q9Y2L9 728 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 STARD13Q9Y3M8 1113 aa19.86■□□□□ 0.77
SCARF1-202ENST00000348987 THAP12O43422 761 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 BMP3P12645 472 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 CIITAP33076 1130 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 VHLP40337 213 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 BMT2Q1RMZ1 405 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 DACT2Q5SW24 774 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 SNX30Q5VWJ9 437 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 CPNE8Q86YQ8 564 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 CCNJLQ8IV13 435 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 SCG3Q8WXD2 468 aaKnown RBP19.85■□□□□ 0.77
SCARF1-202ENST00000348987 HSD17B14Q9BPX1 270 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 IDI2Q9BXS1 227 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 GPR88Q9GZN0 384 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 METTL14Q9HCE5 456 aaKnown RBP19.85■□□□□ 0.77
SCARF1-202ENST00000348987 WRAP73Q9P2S5 460 aaPredicted RBP19.85■□□□□ 0.77
SCARF1-202ENST00000348987 STOML1Q9UBI4 398 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 SLITRK3O94933 977 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 CFBP00751 764 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 MOGSQ13724 837 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 ARHGAP44Q17R89 818 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 PPP1R21Q6ZMI0 780 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 PODNQ7Z5L7 613 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 ZC3H18Q86VM9 953 aaKnown RBP19.85■□□□□ 0.77
SCARF1-202ENST00000348987 MYCT1Q8N699 235 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 NRG4Q8WWG1 115 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 MTUS1Q9ULD2 1270 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 PRR12Q9ULL5 1215 aa19.85■□□□□ 0.77
SCARF1-202ENST00000348987 SCN9AQ15858 1988 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms