RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ZNF365Q70YC5 407 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 CLEC10AQ8IUN9 316 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 MAML1Q92585 1016 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 C12orf65Q9H3J6 166 aaKnown RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 FBXO6Q9NRD1 293 aaPredicted RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 SLIT2O94813 1529 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 UBAP1LF5GYI3 381 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 OPHN1O60890 802 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 TROVE2P10155 538 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■■■□□ 16.9
LMNA-201ENST00000347559 ATF3P18847 181 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 NMT1P30419 496 aaKnown RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP46P62068 366 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 LVRNQ6Q4G3 990 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 RINLQ6ZS11 566 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 CEP128Q6ZU80 1094 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 PHLDB2Q86SQ0 1253 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 ZNF75CPQ92670 426 aaPredicted RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 TRAIPQ9BWF2 469 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 BHMT2Q9H2M3 363 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 LRRC19Q9H756 370 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 ETNK2Q9NVF9 386 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 PHF24Q9UPV7 400 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 MAGEB2O15479 319 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 RAD21O60216 631 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 ZBED4O75132 1171 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 PIAS1O75925 651 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 IL6STP40189 918 aaPredicted RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 CDK8P49336 464 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 USP17L6PQ6QN14 398 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 SLC5A5Q92911 643 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 RBM15Q96T37 977 aaKnown RBP eCLIP16.3■□□□□ 0.26e-7■■□□□ 14.4
LMNA-201ENST00000347559 ASCC2Q9H1I8 757 aaPredicted RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 TLE6Q9H808 572 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 KIAA1586Q9HCI6 787 aa16.3■□□□□ 0.2
LMNA-201ENST00000347559 STX18Q9P2W9 335 aaKnown RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 RPL26L1Q9UNX3 145 aaKnown RBP16.3■□□□□ 0.2
LMNA-201ENST00000347559 A0A1W2PPM1 405 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 A6NJR5 290 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 SLC16A3O15427 465 aaKnown RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 HNRNPRO43390 633 aaKnown RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 ESRRAP11474 423 aaPredicted RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 IVDP26440 423 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 SLC16A2P36021 539 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 MYL7Q01449 175 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 LRRC36Q1X8D7 754 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 LIN52Q52LA3 116 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 ARHGAP18Q8N392 663 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 CELF1Q92879 486 aaKnown RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 HIC2Q96JB3 615 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 CENPKQ9BS16 269 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 MMADHCQ9H3L0 296 aaPredicted RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 SAYSD1Q9NPB0 183 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 LARSQ9P2J5 1176 aaKnown RBP16.29■□□□□ 0.2
LMNA-201ENST00000347559 C2orf71A6NGG8 1288 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 CTC1Q2NKJ3 1217 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 IZUMO3Q5VZ72 239 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 NCAPG2Q86XI2 1143 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 NSL1Q96IY1 281 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 SAR1AQ9NR31 198 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 LNPEPQ9UIQ6 1025 aa16.29■□□□□ 0.2
LMNA-201ENST00000347559 C2CD2LO14523 706 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 ZSCAN9O15535 394 aaPredicted RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 FAM200BP0CF97 657 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 PLS3P13797 630 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 MAGEA4P43358 317 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 MAPK6Q16659 721 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 HYIQ5T013 277 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 GSTA5Q7RTV2 222 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 FBXO33Q7Z6M2 555 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 SDCCAG8Q86SQ7 713 aaPredicted RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 DENND1AQ8TEH3 1009 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 ZNF653Q96CK0 615 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 NMD3Q96D46 503 aaKnown RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 ACTL7BQ9Y614 415 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 TTC36A6NLP5 189 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 TCEA3O75764 348 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 ZWINTO95229 277 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 POTEJP0CG39 1038 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 SERPINB3P29508 390 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 PGM1P36871 562 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 PABPC1LQ4VXU2 614 aaKnown RBP16.28■□□□□ 0.2
LMNA-201ENST00000347559 TXNRD3Q86VQ6 643 aa16.28■□□□□ 0.2
LMNA-201ENST00000347559 TAS2R1Q9NYW7 299 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms