RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 KDM1AO60341 852 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 PDIA5Q14554 519 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 P3H1Q32P28 736 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 TEX13BQ9BXU2 312 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 GJB4Q9NTQ9 266 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 TNS3Q68CZ2 1445 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 IL18RAPO95256 599 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 ATP2C1P98194 919 aaPredicted RBP24.32■■□□□ 1.48
NPAS3-201ENST00000346562 INPP5AQ14642 412 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 CEP70Q8NHQ1 597 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 WWP1Q9H0M0 922 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 ARHGEF9O43307 516 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 RALBP11234 206 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 DAB2P98082 770 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 SV2CQ496J9 727 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 OTULINQ96BN8 352 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 CYP26A1O43174 497 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 KRT8P05787 483 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 ITGA4P13612 1032 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 CUL3Q13618 768 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 STAT4Q14765 748 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 NBPF9Q3BBW0 867 aa24.32■■□□□ 1.48
NPAS3-201ENST00000346562 DDX47Q9H0S4 455 aaKnown RBP24.32■■□□□ 1.48
NPAS3-201ENST00000346562 SPATA16Q9BXB7 569 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 GMNCA6NCL1 334 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 GSG1L2A8MUP6 293 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 EEF2KO00418 725 aaKnown RBP24.31■■□□□ 1.48
NPAS3-201ENST00000346562 UGP2Q16851 508 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 KDELC2Q7Z4H8 507 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 CLMNQ96JQ2 1002 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 SENP7Q9BQF6 1050 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 ARHGEF38Q9NXL2 777 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 CHGBP05060 677 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 ZNF157P51786 506 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-201ENST00000346562 RARS2Q5T160 578 aaKnown RBP24.31■■□□□ 1.48
NPAS3-201ENST00000346562 ATXN7L3BQ96GX2 97 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 UNC45AQ9H3U1 944 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 SNX9Q9Y5X1 595 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 MEFVO15553 781 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-201ENST00000346562 KRT16P08779 473 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 CATSPER3Q86XQ3 398 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 FMR1NBQ8N0W7 255 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-201ENST00000346562 CATSPER1Q8NEC5 780 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 SEPT5Q99719 369 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-201ENST00000346562 ECT2Q9H8V3 914 aa24.31■■□□□ 1.48
NPAS3-201ENST00000346562 SCP2P22307 547 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 SGSM1Q2NKQ1 1148 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 IL31Q6EBC2 164 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 ATL2Q8NHH9 583 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 ELMO2Q96JJ3 720 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 SLC30A1Q9Y6M5 507 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 B4GALNT2Q8NHY0 566 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 NSMCE4AQ9NXX6 385 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 KCND2Q9NZV8 630 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 CTSHP09668 335 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 KCNB1Q14721 858 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 SMAD1Q15797 465 aaKnown RBP24.3■■□□□ 1.48
NPAS3-201ENST00000346562 LMBRD2Q68DH5 695 aaPredicted RBP24.3■■□□□ 1.48
NPAS3-201ENST00000346562 TARSL2A2RTX5 802 aaKnown RBP24.3■■□□□ 1.48
NPAS3-201ENST00000346562 RPS6KA5O75582 802 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 RUBCNQ92622 972 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 NDUFS3O75489 264 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 IRF1P10914 325 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 PRKCQQ04759 706 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 LRRC23Q53EV4 343 aaPredicted RBP24.3■■□□□ 1.48
NPAS3-201ENST00000346562 SIRT2Q8IXJ6 389 aa24.3■■□□□ 1.48
NPAS3-201ENST00000346562 DYNC1LI2O43237 492 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-201ENST00000346562 SLFNL1Q499Z3 407 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 STRIP1Q5VSL9 837 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 CYP4F11Q9HBI6 524 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 PP2D1A8MPX8 630 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 C6orf222P0C671 652 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-201ENST00000346562 PNMA6AP0CW24 399 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-201ENST00000346562 NBPF10Q6P3W6 841 aaKnown RBP24.29■■□□□ 1.48
NPAS3-201ENST00000346562 ZNF280CQ8ND82 737 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 FAM84BQ96KN1 310 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-201ENST00000346562 ISCA1Q9BUE6 129 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 KRT87PA6NCN2 255 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 ACADSBP45954 432 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 CCDC15Q0P6D6 951 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 SPDYAQ5MJ70 313 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 TSC22D3Q99576 134 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 CATSPERBQ9H7T0 1116 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 MLXIPLQ9NP71 852 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 HMBSP08397 361 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 FBXO38Q6PIJ6 1188 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 SEPT1Q8WYJ6 367 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 OSBPL5Q9H0X9 879 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-201ENST00000346562 SPON1Q9HCB6 807 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 SERPINB4P48594 390 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 ARHGAP15Q53QZ3 475 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 ARMC6Q6NXE6 501 aa24.29■■□□□ 1.48
NPAS3-201ENST00000346562 NMT1P30419 496 aaKnown RBP24.28■■□□□ 1.48
NPAS3-201ENST00000346562 SESN2P58004 480 aaPredicted RBP24.28■■□□□ 1.48
NPAS3-201ENST00000346562 ZNF555Q8NEP9 628 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 PHF21AQ96BD5 680 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 PPP3CCP48454 512 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 COG1Q8WTW3 980 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 A2ML1A8K2U0 1454 aa24.28■■□□□ 1.48
NPAS3-201ENST00000346562 DMTNQ08495 405 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms