RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MMEP08473 750 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 CXCL9Q07325 125 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 LRRC14Q15048 493 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 MGAT5BQ3V5L5 792 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 HP1BP3Q5SSJ5 553 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-202ENST00000346436 TBC1D1Q86TI0 1168 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-202ENST00000346436 SRRM1Q8IYB3 904 aaKnown RBP11.53□□□□□ -0.56
CLCN6-202ENST00000346436 DCUN1D1Q96GG9 259 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 TRIM54Q9BYV2 358 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 GLIS2Q9BZE0 524 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-202ENST00000346436 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
CLCN6-202ENST00000346436 KANSL3Q9P2N6 904 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 MID2Q9UJV3 735 aa11.53□□□□□ -0.56
CLCN6-202ENST00000346436 SLC18A3Q16572 532 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 CEP55Q53EZ4 464 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 RAPH1Q70E73 1250 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 ITIH5Q86UX2 942 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.52□□□□□ -0.562e-8■■□□□ 13.2
CLCN6-202ENST00000346436 REEP2Q9BRK0 252 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 CELF4Q9BZC1 486 aaKnown RBP11.52□□□□□ -0.56
CLCN6-202ENST00000346436 OLFML3Q9NRN5 406 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 ASNSD1Q9NWL6 643 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 FOXP2O15409 715 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 ADCY3O60266 1144 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 KRT1P04264 644 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 PDE1BQ01064 536 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 DCAF4L1Q3SXM0 396 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 ZC2HC1CQ53FD0 456 aaPredicted RBP11.52□□□□□ -0.56
CLCN6-202ENST00000346436 EFHC2Q5JST6 749 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 CCHCR1Q8TD31 782 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 HDAC7Q8WUI4 952 aa11.52□□□□□ -0.56
CLCN6-202ENST00000346436 OLA1Q9NTK5 396 aaKnown RBP11.52□□□□□ -0.56
CLCN6-202ENST00000346436 SAT1P21673 171 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 RBP5P82980 135 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 BTG3Q14201 252 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF235Q14590 738 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 TMEM132DQ14C87 1099 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 PASD1Q8IV76 773 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 HNRNPLLQ8WVV9 542 aaKnown RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 EIF2AK1Q9BQI3 630 aaKnown RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 CALN1Q9BXU9 219 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 NGRNQ9NPE2 291 aaKnown RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 DUOXA2Q1HG44 320 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 STMN2Q93045 179 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 MCUR1Q96AQ8 359 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 IL17RBQ9NRM6 502 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 CPP00450 1065 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 ACADMP11310 421 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 TAL1P17542 331 aaPredicted RBP11.52□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 LRP10Q7Z4F1 713 aa11.52□□□□□ -0.57
CLCN6-202ENST00000346436 WDR91A4D1P6 747 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 SLC16A4O15374 487 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 CALB1P05937 261 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 SDC4P31431 198 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 PNPLA4P41247 253 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 IRAK1P51617 712 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 PRMT2P55345 433 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 SCFD1Q8WVM8 642 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 FSD1LQ9BXM9 530 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
CLCN6-202ENST00000346436 JMJD4Q9H9V9 463 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 TLK1Q9UKI8 766 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 PIK3C2AO00443 1686 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 NDUFB10O96000 172 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 CHEK2O96017 543 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 FTLP02792 175 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-202ENST00000346436 UCHL3P15374 230 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 BACE1P56817 501 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 KLC3Q6P597 504 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 C16orf86Q6ZW13 317 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ANKS3Q6ZW76 656 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ARL8AQ96BM9 186 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 SAAL1Q96ER3 474 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ARHGAP20Q9P2F6 1191 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ZSCAN5CA6NGD5 496 aaPredicted RBP11.51□□□□□ -0.57
CLCN6-202ENST00000346436 CCDC188H7C350 402 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 SYNCRIPO60506 623 aaKnown RBP11.51□□□□□ -0.57
CLCN6-202ENST00000346436 PPATQ06203 517 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 TFDP2Q14188 446 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 CDCA5Q96FF9 252 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 VIPAS39Q9H9C1 493 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ABCF3Q9NUQ8 709 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 SGK1O00141 431 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF197O14709 1029 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 GPC4O75487 556 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 FGFR4P22455 802 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 PDIA5Q14554 519 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
CLCN6-202ENST00000346436 RDM1Q8NG50 284 aa11.51□□□□□ -0.57
CLCN6-202ENST00000346436 KBTBD4Q9NVX7 518 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms