RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 F8VZ95 297 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 SOX5P35711 763 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PRKCIP41743 596 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 STAT1P42224 750 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 NAMPTP43490 491 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 GCLCP48506 637 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 MXI1P50539 228 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 EPHA4P54764 986 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 MAP2K1Q02750 393 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 CAPSQ13938 189 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ARHGAP44Q17R89 818 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ARHGEF19Q8IW93 802 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ATP8B4Q8TF62 1192 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 TRAPPC12Q8WVT3 735 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ZBTB10Q96DT7 871 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ZBTB45Q96K62 511 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 MFSD14AQ96MC6 490 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 FAM213AQ9BRX8 229 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 HAPLN2Q9GZV7 340 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 SUGCTQ9HAC7 445 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 DIS3Q9Y2L1 958 aaKnown RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 USP3Q9Y6I4 520 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 TRPM7Q96QT4 1865 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 LOC102724159A0A0B4J2E5 919 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 H0YCG3 227 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 TULP2O00295 520 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ZBTB48P10074 688 aaPredicted RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 GARTP22102 1010 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 LIG4P49917 911 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ARHGAP1Q07960 439 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 CYP24A1Q07973 514 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 STRN3Q13033 797 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PWP2Q15269 919 aaKnown RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 MAMDC4Q6UXC1 1216 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PLPPR4Q7Z2D5 763 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 TRAPPC11Q7Z392 1133 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 GPR142Q7Z601 462 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 GPD1LQ8N335 351 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 LRRC71Q8N4P6 559 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PARD3BQ8TEW8 1205 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 SCFD2Q8WU76 684 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PRPF31Q8WWY3 499 aaKnown RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 SEMA4DQ92854 862 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 FAM167AQ96KS9 214 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PARK7Q99497 189 aaKnown RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 EGFL7Q9UHF1 273 aa9.98□□□□□ -0.81
ATG4A-202ENST00000345734 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 BZW2Q9Y6E2 419 aaKnown RBP9.98□□□□□ -0.81
ATG4A-202ENST00000345734 K7ERI5 159 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 P4HA2O15460 535 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 BUB1O43683 1085 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 SRGAP2O75044 1071 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 N4BP1O75113 896 aaKnown RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 CLSTN1O94985 981 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 DLATP10515 647 aaKnown RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 FERP16591 822 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 HUNKP57058 714 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 NLRP11P59045 1033 aaKnown RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 DHX9Q08211 1270 aaKnown RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 OLIG1Q8TAK6 271 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 KAT5Q92993 513 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 TARS2Q9BW92 718 aaKnown RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 KATNBL1Q9H079 304 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 EPC1Q9H2F5 836 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 UBE2TQ9NPD8 197 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 EFCAB8A8MWE9 144 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 FOXN3O00409 490 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 TACC1O75410 805 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 SNAI1O95863 264 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 GJB1P08034 283 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 ADCYAP1R1P41586 468 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 ACOT2P49753 483 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 CETN1Q12798 172 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 GRB14Q14449 540 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 ZBTB41Q5SVQ8 909 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 DPP9Q86TI2 863 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 NPAS4Q8IUM7 802 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 ABRAQ8N0Z2 381 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 LNX1Q8TBB1 728 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 UBXN4Q92575 508 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 ZNF668Q96K58 619 aaPredicted RBP9.97□□□□□ -0.81
ATG4A-202ENST00000345734 RNPEPQ9H4A4 650 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 KAT6AQ92794 2004 aa9.97□□□□□ -0.81
ATG4A-202ENST00000345734 IGKV6-21A0A0C4DH24 114 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 RBM47A0AV96 593 aaKnown RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 FAM170AA1A519 330 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 DDX3XO00571 662 aaKnown RBP eCLIP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 PMM2O15305 246 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 STRNO43815 780 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 EXTL3O43909 919 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 ADCY3O60266 1144 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 ALDH1A1P00352 501 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 SRGAP2CP0DJJ0 459 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 ZNF16P17020 682 aaPredicted RBP9.96□□□□□ -0.82
ATG4A-202ENST00000345734 IGFBP4P22692 258 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 KLRC1P26715 233 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 LAMTOR4Q0VGL1 99 aa9.96□□□□□ -0.82
ATG4A-202ENST00000345734 CBLBQ13191 982 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms