RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 RBAKQ9NYW8 714 aaPredicted RBP22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 KIAA1468Q9P260 1216 aa22.62■■□□□ 1.21
SMARCB1-202ENST00000344921 CALUO43852 315 aaPredicted RBP22.61■■□□□ 1.21
SMARCB1-202ENST00000344921 PRCPP42785 496 aa22.61■■□□□ 1.21
SMARCB1-202ENST00000344921 XXYLT1Q8NBI6 393 aa22.61■■□□□ 1.21
SMARCB1-202ENST00000344921 MICAL1Q8TDZ2 1067 aa22.61■■□□□ 1.21
SMARCB1-202ENST00000344921 PAAF1Q9BRP4 392 aa22.61■■□□□ 1.21
SMARCB1-202ENST00000344921 PLXNA4Q9HCM2 1894 aa22.61■■□□□ 1.21
SMARCB1-202ENST00000344921 ZNF233A6NK53 670 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 XPOTO43592 962 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 EXOC3O60645 756 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 POU5F1Q01860 360 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 UBE3AQ05086 875 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 STIM1Q13586 685 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 JADE1Q6IE81 842 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 C18orf25Q96B23 403 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 LMAN2LQ9H0V9 348 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 ASB7Q9H672 318 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 TADA2AO75478 443 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 IL18RAPO95256 599 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 MBD3O95983 291 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 MCM4P33991 863 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 HSP90AA2PQ14568 343 aaPredicted RBP22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 MRPL38Q96DV4 380 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 UROC1Q96N76 676 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 UBQLN1Q9UMX0 589 aaKnown RBP22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 MTCH2Q9Y6C9 303 aa22.6■■□□□ 1.21
SMARCB1-202ENST00000344921 TRANK1O15050 2925 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 ADRB2P07550 413 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 DNAJB1P25685 340 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 CLCNKBP51801 687 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 SOX4Q06945 474 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 TMEM132DQ14C87 1099 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 SNRNP35Q16560 246 aaKnown RBP22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 CBWD2Q8IUF1 395 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 BRSK2Q8IWQ3 736 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 C12orf56Q8IXR9 622 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 HASPINQ8TF76 798 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 BCL7CQ8WUZ0 217 aaPredicted RBP22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 TSPAN18Q96SJ8 248 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 TLR9Q9NR96 1032 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 LMCD1Q9NZU5 365 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 LZTS1Q9Y250 596 aa22.59■■□□□ 1.21
SMARCB1-202ENST00000344921 F8W810 466 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 NR3C1P04150 777 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 CA8P35219 290 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 MORC3Q14149 939 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 ENTPD7Q9NQZ7 604 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 MARCH5Q9NX47 278 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 TUBGCP4Q9UGJ1 667 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 ADAM28Q9UKQ2 775 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 TRAF3IP3Q9Y228 551 aa22.58■■□□□ 1.21
SMARCB1-202ENST00000344921 PDCD11Q14690 1871 aaKnown RBP22.58■■□□□ 1.2
SMARCB1-202ENST00000344921 B3GAT3O94766 335 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 NFICP08651 508 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 BMS1Q14692 1282 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 COBLL1Q53SF7 1204 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 TMC7Q7Z402 723 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 DDX53Q86TM3 631 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 VPS52Q8N1B4 723 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 BEST2Q8NFU1 509 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 PPM1EQ8WY54 764 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 DDX27Q96GQ7 796 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 DERAQ9Y315 318 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 CCDC85BQ15834 202 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 UPP1Q16831 310 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 CEP135Q66GS9 1140 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 DCLRE1AQ6PJP8 1040 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 ADSSL1Q8N142 457 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 TRIML1Q8N9V2 468 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 FBXL18Q96ME1 805 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 TSG101Q99816 390 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 TCF25Q9BQ70 676 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 PDE11AQ9HCR9 933 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 C2CD2Q9Y426 696 aa22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-202ENST00000344921 PODXLO00592 558 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 PSMA7O14818 248 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 KIF4AO95239 1232 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 POU3F3P20264 500 aaPredicted RBP22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 CYP3A5P20815 502 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 NR2F2P24468 414 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 RPL13P26373 211 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 RPL9P32969 192 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 PPP1R2P41236 205 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 ERVFC1P60507 584 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 TFAMQ00059 246 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 CAMK1Q14012 370 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 ZBTB6Q15916 424 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 KLHL10Q6JEL2 608 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 SLC9A9Q8IVB4 645 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 STK39Q9UEW8 545 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 STXBP5LQ9Y2K9 1186 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 FRMD4BQ9Y2L6 1034 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 ANK1P16157 1881 aa22.56■■□□□ 1.2
SMARCB1-202ENST00000344921 BMP6P22004 513 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 IRS1P35568 1242 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 GUCY2FP51841 1108 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 WNT7BP56706 349 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 ADAM9Q13443 819 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms